Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00885 and BPUM_0460

See DNA alignment / Visit BSNT_00885 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:37
# Commandline: needle
#    -asequence pep-align/BSNT_00885___ydeB.1.24716.seq
#    -bsequence pep-align/BPUM_0460___ydeB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00885___ydeB-BPUM_0460___ydeB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00885___ydeB-BPUM_0460___ydeB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00885___ydeB
# 2: BPUM_0460___ydeB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     126/158 (79.7%)
# Similarity:   142/158 (89.9%)
# Gaps:           5/158 ( 3.2%)
# Score: 649.0
# 
#
#=======================================

BSNT_00885___      1 MEVDDMFQIGDNIVYPMHGAGIIEAIEEKEFLEEKQQYYVIRMSISNMTV     50
                          ||||||||||||||||||||||||||.:||||||||:||||:|.|
BPUM_0460___y      1 -----MFQIGDNIVYPMHGAGIIEAIEEKEFSDEKQQYYVIKMSISHMKV     45

BSNT_00885___     51 MIPTSKILSSNIRPVTDILALKHIMHIFQHGESDRLLPWKQRYKINTDKI    100
                     ||||.||..|.||||||:|||.::||:|||||||:||.||:|:.|||:||
BPUM_0460___y     46 MIPTRKISGSRIRPVTDLLALNNVMHVFQHGESDQLLTWKERHTINTNKI     95

BSNT_00885___    101 KTGEIQEGAEVVRDLMRMKKEKALNASEKKMLDNAYEFLISELEVIKGIT    150
                     |||:||:||||||||||||||||||||||||||.|:|||:||||||:|||
BPUM_0460___y     96 KTGDIQDGAEVVRDLMRMKKEKALNASEKKMLDEAHEFLLSELEVIEGIT    145

BSNT_00885___    151 EKQIKSFG    158
                     |||||||.
BPUM_0460___y    146 EKQIKSFC    153


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