Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00770 and BPUM_0422

See DNA alignment / Visit BSNT_00770 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:32
# Commandline: needle
#    -asequence pep-align/BSNT_00770___ydbJ.1.24716.seq
#    -bsequence pep-align/BPUM_0422___ydbJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00770___ydbJ-BPUM_0422___ydbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00770___ydbJ-BPUM_0422___ydbJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00770___ydbJ
# 2: BPUM_0422___ydbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     174/315 (55.2%)
# Similarity:   231/315 (73.3%)
# Gaps:          14/315 ( 4.4%)
# Score: 900.0
# 
#
#=======================================

BSNT_00770___      1 MAEPILHIEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRI     50
                     |...:|.:|.:||:||.|.||:.||:::.:|||:|||||||||||||||:
BPUM_0422___y      1 MESAVLKVEKVDKRIGRKIILQDISIEIGKGEIVGLLGPNGSGKTTLIRL     50

BSNT_00770___     51 IVGLLKQNSGSVTISGFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLK    100
                     ||||:|:|:|.:.|:|:..|.:|..||.:||||:||||||.||||:|||:
BPUM_0422___y     51 IVGLMKKNNGRIMINGYSQDEDFRHAMSSVGAIIENPEFYSYLTGFENLE    100

BSNT_00770___    101 HFANMHKKIADERLDEVVERVGLTSAIHDKVKTYSLGMRQRLGIAQAILH    150
                     .:|.||..:.:||:.|||:||.|..|||.|||||||||:|||||||||||
BPUM_0422___y    101 LYAAMHNGVTEERMHEVVKRVRLEHAIHQKVKTYSLGMKQRLGIAQAILH    150

BSNT_00770___    151 RPKLLILDEPTNGLDPAGMKDFRDHIKELAEMEGTAVLFATHLLREVEDL    200
                     :|.|||||||||||||||||:||:|::.|...|||:||||||||.|||:|
BPUM_0422___y    151 QPNLLILDEPTNGLDPAGMKEFREHLQTLVREEGTSVLFATHLLHEVEEL    200

BSNT_00770___    201 CDRVIIIQKGEIKAEVSLQGTGQTTEKAIIEVQPQEKALNWLTGNQYQAE    250
                     |||:||||||||||...|:.. :..|:.::.:||.|||:.||..:.|..|
BPUM_0422___y    201 CDRMIIIQKGEIKASTMLRDI-EGKEQMLMNIQPVEKAVTWLETHDYTYE    249

BSNT_00770___    251 SQDGTIVVEVAKENIPELNRSLVGQDLNVFSITPYTQSLEDEFIKAT---    297
                     .....:::::.||.:||||:.||....:|..:||...|:|:.|:|.|   
BPUM_0422___y    250 RNGSHVLLQLNKEQVPELNKQLVLAGFDVLEMTPQKPSIEEAFMKWTEGG    299

BSNT_00770___    298 ----TAHQEEGEELV    308
                         :.|||      
BPUM_0422___y    300 TADASTHQE------    308


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