Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00731 and BPUM_0389
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:30
# Commandline: needle
# -asequence pep-align/BSNT_00731___ydaC.1.24716.seq
# -bsequence pep-align/BPUM_0389___ydaC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00731___ydaC-BPUM_0389___ydaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00731___ydaC-BPUM_0389___ydaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00731___ydaC
# 2: BPUM_0389___ydaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 97/218 (44.5%)
# Similarity: 134/218 (61.5%)
# Gaps: 20/218 ( 9.2%)
# Score: 519.5
#
#
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BSNT_00731___ 1 ---------------MINMLSRRFSRPKGVIGMIAGYIMAAENQTLNQWT 35
|::.:|:.||||||.:|.|||:|||.||:.||||.
BPUM_0389___y 1 MDKIGYMINKKERSHMLSTISKTFSRPKGWLGSIAGFIMANENKALNQWA 50
BSNT_00731___ 36 INQLGITRGDSILEVGFGPGYCMQQMLKREKDVHLHGIDVSEAMLKLAAR 85
|..|.::.|::|||:|:||||.::.|||...|:|:.|:|.|..|.:.|..
BPUM_0389___y 51 IQHLDLSDGENILEIGYGPGYSIKHMLKHYDDLHIDGLDASSTMQEQAQS 100
BSNT_00731___ 86 RV----KPKGVRLIQGSIETFPLPASFYDKVISVNNYTIWNDQTKGMKQI 131
|| |.|.|||..|.||...||...||||:||||:|||:|...|:..:
BPUM_0389___y 101 RVNKRSKDKQVRLYVGKIEKTRLPGEQYDKVLSVNNFTIWDDPKTGLLNL 150
BSNT_00731___ 132 YRALKPGGKAAITMQPREADASPEKTKSFGRQMIADFKAAGFEDIDIQFK 181
|..||||||..|.|||||..|...:||..|..::.|.:.|||:...::::
BPUM_0389___y 151 YHTLKPGGKLVIVMQPREKGADASRTKEMGENILNDLQFAGFDHFSVEYE 200
BSNT_00731___ 182 NIKPELSVCASAKKPAT- 198
.|:|.|:||.:||||.:
BPUM_0389___y 201 EIRPTLAVCVTAKKPRSE 218
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