Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00710 and BPUM_0379

See DNA alignment / Visit BSNT_00710 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:29
# Commandline: needle
#    -asequence pep-align/BSNT_00710___ycsF.1.24716.seq
#    -bsequence pep-align/BPUM_0379___ycsF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00710___ycsF-BPUM_0379___ycsF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00710___ycsF-BPUM_0379___ycsF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00710___ycsF
# 2: BPUM_0379___ycsF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     180/257 (70.0%)
# Similarity:   212/257 (82.5%)
# Gaps:           5/257 ( 1.9%)
# Score: 942.0
# 
#
#=======================================

BSNT_00710___      1 MFQIDLNCDLGESFGSYKIGLDQDILEYVTSANIACGFHAGDPSVMRKTV     50
                     |:|:|:|||||||||.|.||.|:.|||||||||||||||||||:||||||
BPUM_0379___y      1 MYQVDINCDLGESFGQYTIGSDEQILEYVTSANIACGFHAGDPTVMRKTV     50

BSNT_00710___     51 ALAAEKGVKIGAHPGLPDLLGFGRRNMAISPEEAYDLVVYQIGALSGFLK    100
                     .:|.||||:|||||||.||:|||||.:|||.|||||||||||||||.|||
BPUM_0379___y     51 RMALEKGVQIGAHPGLQDLVGFGRRPIAISAEEAYDLVVYQIGALSAFLK    100

BSNT_00710___    101 AEGLHMQHVKPHGALYNMAAVDQKLSDAIAKAVYKIDPGLILFGLAESEL    150
                     |||..|||||||||||||||.:.:||::||||||.:||.|:|:||:.|||
BPUM_0379___y    101 AEGSTMQHVKPHGALYNMAAKNTELSESIAKAVYHVDPSLVLYGLSGSEL    150

BSNT_00710___    151 VKAGERIGLQTANEVFADRTYQSDGTLTPRSQPDALIESDDAAVTQVIKM    200
                     ..||||:|||.|:|||:|||||:|||||.|.:|:||||.|:.||.||::|
BPUM_0379___y    151 ALAGERMGLQVAHEVFSDRTYQTDGTLTSRREPNALIEDDELAVQQVVRM    200

BSNT_00710___    201 VKEGAVKSQQGHDVSLKADTVCIHGDGAHALTFAQKIRKQLKAAGIEVTA    250
                     |:||.|.:.||.|:|||||||||||||.|||.||:.|..:||.|.|.:.|
BPUM_0379___y    201 VREGKVHTVQGEDISLKADTVCIHGDGIHALQFAKTITSKLKEASIRLKA    250

BSNT_00710___    251 ISEQRST    257
                     ..     
BPUM_0379___y    251 FQ-----    252


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