Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00680 and BPUM_0358

See DNA alignment / Visit BSNT_00680 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:27
# Commandline: needle
#    -asequence pep-align/BSNT_00680___ycnC.1.24716.seq
#    -bsequence pep-align/BPUM_0358___ycnC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00680___ycnC-BPUM_0358___ycnC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00680___ycnC-BPUM_0358___ycnC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00680___ycnC
# 2: BPUM_0358___ycnC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     123/305 (40.3%)
# Similarity:   200/305 (65.6%)
# Gaps:          19/305 ( 6.2%)
# Score: 605.0
# 
#
#=======================================

BSNT_00680___      1 -----------MLDKKTDILLAARKLFSEKDFTSVSMQAIAEECKMSKAS     39
                                |.:|:.:||..::||||:|.:.|||||:||:.||:||||
BPUM_0358___y      1 MVLPIRKGLMKMNEKQEEILRVSKKLFSQKGYMSVSMQSIADACKISKAS     50

BSNT_00680___     40 IYKLFQSKEDLLLELLSFNQKQMVAAASRLQENTALTPEERLTQKVKMEL     89
                     |||||.|||.|||||:.:||.:|...:..:...|.|:.:|:.|:|:|:||
BPUM_0358___y     51 IYKLFDSKEALLLELIKYNQCKMREISQIIHSETTLSKKEKFTKKIKLEL    100

BSNT_00680___     90 EGFRRNQQFFNMLTYGNPKLHNDRVKQHIHQTRSTIICWHRDSLIQAYGE    139
                     |.|:.|.:|.|||::.....|:..|.:|:.:||:.|:..|||.::..|||
BPUM_0358___y    101 EEFKENHKFLNMLSFEAFSQHSPIVIKHLRETRTIIMQRHRDIILSTYGE    150

BSNT_00680___    140 TILPFVWDLVIILHGMMREFLMLIKIEEKPLELDPIAEFIISTLNQIIKN    189
                     ::.|:||||||:|:|:||||::::.||.|.::|:..||.||..::::.|.
BPUM_0358___y    151 SVAPYVWDLVIVLNGLMREFILMLAIERKNIQLENAAEMIIGVMDRVSKK    200

BSNT_00680___    190 RETRQSLLPPEAIELYIHSASSYKPKDKSVL--LSESLKELHKGISSLSA    237
                     ..:.:.:|..|.::.|:.|......::|.|:  |::..:|||    :||.
BPUM_0358___y    201 PCSIEPVLTDELMDSYLLSTQDEYDEEKLVISYLTKIKQELH----TLSN    246

BSNT_00680___    238 ADYDVDELTSAAAMLEEEAKKEEPRAFLLKSLIGYLEQTSVLTQPVSMLK    287
                     .: :.|:|.||..:|.||..|::||.||:.||:.||.:.|||:|.||.||
BPUM_0358___y    247 GE-EKDDLLSAFELLSEELSKDQPRTFLISSLLDYLGKNSVLSQNVSQLK    295

BSNT_00680___    288 TLLIT    292
                     :::: 
BPUM_0358___y    296 SIIL-    299


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