Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00633 and BPUM_0326
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:25
# Commandline: needle
# -asequence pep-align/BSNT_00633___ycxD.1.24716.seq
# -bsequence pep-align/BPUM_0326___ycxD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00633___ycxD-BPUM_0326___ycxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00633___ycxD-BPUM_0326___ycxD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00633___ycxD
# 2: BPUM_0326___ycxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 455
# Identity: 243/455 (53.4%)
# Similarity: 329/455 (72.3%)
# Gaps: 21/455 ( 4.6%)
# Score: 1252.5
#
#
#=======================================
BSNT_00633___ 1 MEKYMSLLMRIEEMMQSTAYQEGDRLPSIRQLSARYQVSKSTVIRALQEL 50
|.||..|::.::|.|.|..|..|.::||||.|:|:|.:||||||:||..|
BPUM_0326___y 1 MRKYDQLVLSLKEKMTSGEYHAGMKIPSIRHLAAQYALSKSTVIKALDTL 50
BSNT_00633___ 51 EKRHLIYSVPKSGYYIVKKTGKSRSGQPGP--IDFATSAPDPDVFPYLDF 98
|:.||:|||.:||||:||. |..||:... ||||:|||||.||||:||
BPUM_0326___y 51 EREHLLYSVERSGYYVVKT--KQLSGKEDSTWIDFASSAPDPVVFPYVDF 98
BSNT_00633___ 99 QHCINKAIDTYKNDLFIYGTPKGLPSLIRVLRKLLATQQVFADERHIFIT 148
|||||:|||.|:||||||||..|||||:.|:.|.|...||||:...|.:|
BPUM_0326___y 99 QHCINQAIDLYQNDLFIYGTTNGLPSLLPVISKRLMDYQVFANPEQIVMT 148
BSNT_00633___ 149 SGVQQALSLLCAMPFPNGKEKIAIEQPGYHLMVEQLETLGIPAIGVKRTE 198
||:|.|||:|..:||||||:.|.:|||||||.::.||...:|.:|::|||
BPUM_0326___y 149 SGIQLALSILSTIPFPNGKQTILVEQPGYHLYLQYLEKNQLPVMGIQRTE 198
BSNT_00633___ 199 EGLDIAEVERLFQTESIKFFYTMPRFHNPLGYSLSERDKQELVRLAEAYD 248
:|:|:.|:||:|:.|.|:||||||||.||||.|||:::|:.:..|||.||
BPUM_0326___y 199 KGIDLQELERIFREEEIRFFYTMPRFQNPLGTSLSKQEKRAIAALAEKYD 248
BSNT_00633___ 249 VYLVEDDYLGDLEENKKADPLYAYDLSSHVIYLKSFSKMMFPGLRVGAAV 298
||:|||||:.|||.:.|.||:|:||.:..|||||||||::|||||.||.|
BPUM_0326___y 249 VYIVEDDYIADLEFDAKRDPIYSYDQAGKVIYLKSFSKIIFPGLRTGAVV 298
BSNT_00633___ 299 LPEALTDTFYAYKKLNDIDCSMISQAALEIYLKSGMYGRHKEKIRDSYKE 348
|||.|...|..:|:|.|||.||:|||||||||||||:.||:|:::.:|:.
BPUM_0326___y 299 LPEELISPFSEHKRLIDIDSSMLSQAALEIYLKSGMFERHRERMQTTYRN 348
BSNT_00633___ 349 RSLKLHQAIQTHR---QLGSGRFTFSSGQAPCMHTHLVLPQDLPASRVIH 395
||.:|...:::.: |||. :.|..|||:.:.:.:|.:::|.
BPUM_0326___y 349 RSKQLVTCLKSDQIAYQLGE--------EEPATHTHVRIDRSIPMNQLIQ 390
BSNT_00633___ 396 RLKKQGVLLEAIDRHYLSDYQKENLLKINISNVKTEDIERGVKLLMSHL- 444
:|||..|.:::|||||||.|||:.:|.:||.:||.|.|.|||.||.:..
BPUM_0326___y 391 QLKKASVSIQSIDRHYLSTYQKDPILHLNIWHVKEEQITRGVDLLKTAFQ 440
BSNT_00633___ 444 ----- 444
BPUM_0326___y 441 QIGRY 445
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