Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00609 and BPUM_0310

See DNA alignment / Visit BSNT_00609 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:24
# Commandline: needle
#    -asequence pep-align/BSNT_00609___nin.1.24716.seq
#    -bsequence pep-align/BPUM_0310___nin.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00609___nin-BPUM_0310___nin.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00609___nin-BPUM_0310___nin.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00609___nin
# 2: BPUM_0310___nin
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:      51/135 (37.8%)
# Similarity:    76/135 (56.3%)
# Gaps:          10/135 ( 7.4%)
# Score: 255.0
# 
#
#=======================================

BSNT_00609___      1 MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFE     50
                     |....:...|||||||.||:....|||::||:|:.|.:|:...|..:|||
BPUM_0310___n      1 MNNLNQAYSLSISYHQITVYTGSKTPPVIDWSDDDILQGFAMGDQGVSFE     50

BSNT_00609___     51 AQRNTKAFILLRLNSSETVNSYEKKVTVPFHVTENGIHIESIMSKRLSFD    100
                     ...|.||.:.:.||:..:..|.::.:|:||....:.::|.|:|::.|||.
BPUM_0310___n     51 GINNGKASVTVTLNNDISPASADRTITIPFTHASDQVYITSVMAQVLSFP    100

BSNT_00609___    101 LPKGDYQLTCWTVPAEMSDL---HADTYIIDAVSV    132
                     :|||||||||:|......||   |..|.       
BPUM_0310___n    101 IPKGDYQLTCYTTQQPDEDLYHIHFQTV-------    128


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