Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00572 and BPUM_0302
See
DNA alignment /
Visit
BSNT_00572 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:22
# Commandline: needle
# -asequence pep-align/BSNT_00572___ycgP.1.24716.seq
# -bsequence pep-align/BPUM_0302___ycgP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00572___ycgP-BPUM_0302___ycgP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00572___ycgP-BPUM_0302___ycgP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00572___ycgP
# 2: BPUM_0302___ycgP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity: 218/416 (52.4%)
# Similarity: 302/416 (72.6%)
# Gaps: 11/416 ( 2.6%)
# Score: 1125.5
#
#
#=======================================
BSNT_00572___ 1 MEELLERVFSFSDVDKLIDFISYELQKPVILESADFFLLAYNSYYINHFD 50
|||:||::.:|.||||||.|||..|:|||||||.:..|||||||.|..||
BPUM_0302___y 1 MEEILEKLHTFFDVDKLIAFISGYLKKPVILESTECQLLAYNSYSIQQFD 50
BSNT_00572___ 51 SANQQTIFSKKCPVQIFERFLKDGIIEKLKTEPEPFRVNKIESIGLNQRV 100
..||||||||:||..:.:...|.|:||:|..|.:||.|:..:.:|.|:||
BPUM_0302___y 51 PVNQQTIFSKECPGSVVDWLKKTGVIERLHKESKPFYVSGHDELGFNRRV 100
BSNT_00572___ 101 VVSAKHKGEVMGYIWIQELDQNLTDEELDFLYETSFHVGKIIYKTNKLKQ 150
.||||||.||:|:||:|:::.:|:.|||.||:|.||.|||:|||..|..:
BPUM_0302___y 101 AVSAKHKQEVVGFIWVQDIEDSLSQEELQFLHEASFQVGKVIYKNKKQLE 150
BSNT_00572___ 151 EKEEKAEDLIKRAIYQQFTSEKELRREAERINTVLPSMFSVVILHAANGD 200
:||.|.|:..|:.:...|.:|:||:.|||.::..||::|:|:::|||:..
BPUM_0302___y 151 KKEGKIEEFFKKVMDDHFYTEEELKWEAENLSIPLPAVFTVMVVHAADNK 200
BSNT_00572___ 201 GEAVEDLKENIRSYLNLRDKVSHVLTIESNIVIVVASFSQKSSVSSAASE 250
.|..||:|:.||:||.|.|||:||.:::::||:::.|.|.:.|..:.|::
BPUM_0302___y 201 SETAEDVKDVIRTYLQLEDKVNHVYSVQADIVVILGSLSDRHSPKATAAD 250
BSNT_00572___ 251 FINKLLTHFHFQKIPTPIYIGIGNEYNHLLKLGKSYTEALEVIKAAEITG 300
.|..|.:..|.. |:|:|||:|.||..::|:..|..||:||:||.:|.|
BPUM_0302___y 251 VIAHLQSKAHAH--PSPLYIGMGREYRDVMKMSTSRFEAIEVVKAVKIVG 298
BSNT_00572___ 301 NQENIPYEYAKLGIYRYLESI----EQKNEFLEYENKDLALLKAKDEESS 346
.||.|||:|..||::|:|:|| ::||:| |.||..||.||.:|.
BPUM_0302___y 299 GQELIPYDYENLGVFRFLDSIYSHQKKKNDF----NPDLLRLKEKDRDSQ 344
BSNT_00572___ 347 TELLKTLEIYLLNNCKTKPAAEQLFIHQNTLNYRIKQITEMTSIDLSDFR 396
|..|||||:|||||||.|||||||||||||||||:|||.||||||||.|.
BPUM_0302___y 345 TSFLKTLEVYLLNNCKLKPAAEQLFIHQNTLNYRMKQIFEMTSIDLSHFS 394
BSNT_00572___ 397 TRCQLYLDLMLMKKK- 411
.||:|:::||||||.
BPUM_0302___y 395 QRCELFIELMLMKKDQ 410
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.