Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00572 and BPUM_0302

See DNA alignment / Visit BSNT_00572 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:22
# Commandline: needle
#    -asequence pep-align/BSNT_00572___ycgP.1.24716.seq
#    -bsequence pep-align/BPUM_0302___ycgP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00572___ycgP-BPUM_0302___ycgP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00572___ycgP-BPUM_0302___ycgP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00572___ycgP
# 2: BPUM_0302___ycgP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity:     218/416 (52.4%)
# Similarity:   302/416 (72.6%)
# Gaps:          11/416 ( 2.6%)
# Score: 1125.5
# 
#
#=======================================

BSNT_00572___      1 MEELLERVFSFSDVDKLIDFISYELQKPVILESADFFLLAYNSYYINHFD     50
                     |||:||::.:|.||||||.|||..|:|||||||.:..|||||||.|..||
BPUM_0302___y      1 MEEILEKLHTFFDVDKLIAFISGYLKKPVILESTECQLLAYNSYSIQQFD     50

BSNT_00572___     51 SANQQTIFSKKCPVQIFERFLKDGIIEKLKTEPEPFRVNKIESIGLNQRV    100
                     ..||||||||:||..:.:...|.|:||:|..|.:||.|:..:.:|.|:||
BPUM_0302___y     51 PVNQQTIFSKECPGSVVDWLKKTGVIERLHKESKPFYVSGHDELGFNRRV    100

BSNT_00572___    101 VVSAKHKGEVMGYIWIQELDQNLTDEELDFLYETSFHVGKIIYKTNKLKQ    150
                     .||||||.||:|:||:|:::.:|:.|||.||:|.||.|||:|||..|..:
BPUM_0302___y    101 AVSAKHKQEVVGFIWVQDIEDSLSQEELQFLHEASFQVGKVIYKNKKQLE    150

BSNT_00572___    151 EKEEKAEDLIKRAIYQQFTSEKELRREAERINTVLPSMFSVVILHAANGD    200
                     :||.|.|:..|:.:...|.:|:||:.|||.::..||::|:|:::|||:..
BPUM_0302___y    151 KKEGKIEEFFKKVMDDHFYTEEELKWEAENLSIPLPAVFTVMVVHAADNK    200

BSNT_00572___    201 GEAVEDLKENIRSYLNLRDKVSHVLTIESNIVIVVASFSQKSSVSSAASE    250
                     .|..||:|:.||:||.|.|||:||.:::::||:::.|.|.:.|..:.|::
BPUM_0302___y    201 SETAEDVKDVIRTYLQLEDKVNHVYSVQADIVVILGSLSDRHSPKATAAD    250

BSNT_00572___    251 FINKLLTHFHFQKIPTPIYIGIGNEYNHLLKLGKSYTEALEVIKAAEITG    300
                     .|..|.:..|..  |:|:|||:|.||..::|:..|..||:||:||.:|.|
BPUM_0302___y    251 VIAHLQSKAHAH--PSPLYIGMGREYRDVMKMSTSRFEAIEVVKAVKIVG    298

BSNT_00572___    301 NQENIPYEYAKLGIYRYLESI----EQKNEFLEYENKDLALLKAKDEESS    346
                     .||.|||:|..||::|:|:||    ::||:|    |.||..||.||.:|.
BPUM_0302___y    299 GQELIPYDYENLGVFRFLDSIYSHQKKKNDF----NPDLLRLKEKDRDSQ    344

BSNT_00572___    347 TELLKTLEIYLLNNCKTKPAAEQLFIHQNTLNYRIKQITEMTSIDLSDFR    396
                     |..|||||:|||||||.|||||||||||||||||:|||.||||||||.|.
BPUM_0302___y    345 TSFLKTLEVYLLNNCKLKPAAEQLFIHQNTLNYRMKQIFEMTSIDLSHFS    394

BSNT_00572___    397 TRCQLYLDLMLMKKK-    411
                     .||:|:::||||||. 
BPUM_0302___y    395 QRCELFIELMLMKKDQ    410


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