Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06259 and BPUM_0293
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence pep-align/BSNT_06259___yyaJ.1.24716.seq
# -bsequence pep-align/BPUM_0293.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06259___yyaJ-BPUM_0293.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06259___yyaJ-BPUM_0293.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06259___yyaJ
# 2: BPUM_0293
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 475
# Identity: 129/475 (27.2%)
# Similarity: 216/475 (45.5%)
# Gaps: 41/475 ( 8.6%)
# Score: 440.5
#
#
#=======================================
BSNT_06259___ 1 -MNTIFKQKNTHP------FSNAANRLDRLPISRVHFQVLTALGIVYFFD 43
...:....|:|. .|....|::.:|.||.|.:....:|...|||
BPUM_0293 1 MTLEVSGNSNSHDGQVVDRASQLLTRMESVPFSRWHLKPRIIMGSATFFD 50
BSNT_06259___ 44 LADLFTLSNVAPALIEHWGIPLSTIANVTAASFLGMFLGASLGGRLSDRI 93
..|..:|:.|.|.||..|.:..:.|..:..:.::|..:||...|.|::|.
BPUM_0293 51 AFDALSLAFVLPVLIGMWSLSPAQIGLLIGSGYIGQAIGAIFFGWLAERR 100
BSNT_06259___ 94 GRKKALNLFVFVFSIASLCNAAAWDIPSLMTFRFLTGFGVAAAMVITNSY 143
||..:....|.:.|:.|:....:.:..:|..|||:.|.||...:.:..||
BPUM_0293 101 GRVFSAKWTVLLMSVMSIACVFSGNFMALFIFRFIQGIGVGGEVPVAASY 150
BSNT_06259___ 144 LAEFFPSSVRGKYISFCAMIGLIGVPITNIVSAFVIPLGSWGWRLVFVWG 193
:.|...:..||::.....||..:|:.|:..:.|||:| |:||:.:|:.|
BPUM_0293 151 INELSRAQGRGRFFMLYEMIFPLGLMISAQIGAFVVP--SFGWKWMFLIG 198
BSNT_06259___ 194 AV-GLIYFFFIRRLEESPRWHENRGEYAKADAILNRIEAQVEKEKGPLPA 242
.: |||.|.|...|.|||||..::|.:.:|:.|:..|||..:|. :|.
BPUM_0293 199 GIGGLIVFVFFFMLRESPRWLISKGRFDEAERIIEEIEASTDKR---MPV 245
BSNT_06259___ 243 ASQPKVSETVKQHAGYAGLLKGRNLKITIVLSAVWIFETFGFYGFASWVP 292
|.| ||.:.:: ..:..|......|.|:::..:|....|...|..:|:|
BPUM_0293 246 AKQ--VSSSTEK-GDWKELFSTFYRKRTLIVWGLWFSAYFVSNGLNNWLP 292
BSNT_06259___ 293 SLLKS-----NGVTMENTLWYNVLHSVGAPLGALLGSMISERFQRKW--- 334
||..: .|.::......|:|.:||....|.| |.:..:::|
BPUM_0293 293 SLYNTVYNLPVGDSLRAASLTNILQTVGVFACAFL---IDKVGRKRWATI 339
BSNT_06259___ 335 -ILAASAFLTA--IAGLLYGMTFIPIMIIVFGFIVNITERVFTSNLYAYT 381
.:...|.||| |:|.....:.|.:....:|.:..||.. ||.||
BPUM_0293 340 AFIVTGALLTALWISGASSPESVIYLGSAAYGMMGTITVL-----LYLYT 384
BSNT_06259___ 382 SEPYPTEYRSSGSGLAYGLGRFSNIFGSLLVGFIAVQLGYISVFLFIGGC 431
.|.|||..|..|:..|....|.::....:::|||....|..::|:.....
BPUM_0293 385 PEIYPTRMRVIGTAFATAWLRLASAIAPIMIGFILEVSGVSTIFILFASV 434
BSNT_06259___ 432 WLACSLLLIFFGPNTNAKQI----- 451
.:. ..:|.|....|..|.:
BPUM_0293 435 TVV-GAILAFKMIETREKVLEDIAP 458
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