Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00518 and BPUM_0268
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:20
# Commandline: needle
# -asequence pep-align/BSNT_00518___yceG.1.24716.seq
# -bsequence pep-align/BPUM_0268.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00518___yceG-BPUM_0268.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00518___yceG-BPUM_0268.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00518___yceG
# 2: BPUM_0268
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 538
# Identity: 317/538 (58.9%)
# Similarity: 421/538 (78.3%)
# Gaps: 1/538 ( 0.2%)
# Score: 1756.0
#
#
#=======================================
BSNT_00518___ 1 MRQEELTIHKALPADGDWKSLLFQPLPERDHY-ETAQGLSFSRLAGQILG 49
|..:|:.:::.......||::|.:||||||.| :....||..|||.::||
BPUM_0268 1 MSYKEIIVNQTRAEQEAWKNVLKKPLPERDGYVKDEHTLSLPRLAARVLG 50
BSNT_00518___ 50 TPIDETDYYNELYELSVNDRITILSETLDKTIEPETFQKLQHIHSINQKE 99
||.|.|||:..|:||...|.|.||||||::.||||.||.||.||.|||:|
BPUM_0268 51 TPHDATDYFIYLHELYETDGIHILSETLNRHIEPEHFQALQRIHLINQEE 100
BSNT_00518___ 100 KGLSVSRFVAFLDGEKLIAKHSNPLMHRHLRKALMTLLHTFADSHEKGLN 149
|||||:|||||||||:||.:|.||:|:||:|.:|:.:...|...||.|..
BPUM_0268 101 KGLSVNRFVAFLDGEQLIVRHPNPVMNRHIRLSLIKVFEHFKQLHEGGFQ 150
BSNT_00518___ 150 HPDFRRVLLDVSKFSLNHLNPWLEKTDIEREMPKIVWYGDATKSQLYFLY 199
|||||||||||.|||.|||.|||::.:||.:||.::|||:|.||||||||
BPUM_0268 151 HPDFRRVLLDVVKFSNNHLGPWLKEVNIEEKMPAVIWYGEANKSQLYFLY 200
BSNT_00518___ 200 YLMLVGCDVLLFHPAGIDQLALVDPKQELGFTEKLPDVSELQPFPKEKPD 249
|:||:||||:||||.|.|....:||:::|.|.::.|..::|:|||.|||:
BPUM_0268 201 YVMLIGCDVVLFHPEGEDSFRELDPEEKLTFIDQYPGTTKLEPFPTEKPE 250
BSNT_00518___ 250 RKSTVAYRSTKEIEHVLNHEESMLYKPWQFRDHTPVSVTLKTTYDELFLI 299
||||||||||:|:|.||:.|:||||||||||||||.|:||||||||||||
BPUM_0268 251 RKSTVAYRSTRELEEVLHTEDSMLYKPWQFRDHTPHSITLKTTYDELFLI 300
BSNT_00518___ 300 TKERAFIRPNFKADKHSIEIPNVFAKIMGVSKDNKEYWNRLHTLADYQET 349
.|||:||||||:||:.:|:|||:|||:|||::|.:|||:|:|||.:::||
BPUM_0268 301 AKERSFIRPNFQADRDTIQIPNLFAKMMGVTRDKREYWDRIHTLMEWKET 350
BSNT_00518___ 350 EMVRSFPFTEEIKSNYQFHYSHALDQEGNIDPDKLMASNVWQYKQLPAGV 399
:.:|.||||:|:.|||||||.|||...|.|||:.||.|||||:..|..|.
BPUM_0268 351 KTIRHFPFTKEVTSNYQFHYQHALSSAGEIDPELLMKSNVWQFSHLYEGT 400
BSNT_00518___ 400 QTAIAKTISRMCRHPRLKALHQEQVKDVQIYLFKQTTNLPANLLKLIQMF 449
|.|||:.|||:|:||:|.....|...||:||||||..::...|::|||.|
BPUM_0268 401 QRAIAEAISRICQHPKLLKEGNETELDVRIYLFKQVLHIGQELIELIQTF 450
BSNT_00518___ 450 DYAQTVPKLVLYHTEMSGGLARSDAAALLFLNEIGIDIIIYNPPGHQDIE 499
||||||||::|||||.:|.|.|||||||:||||:|:|:.:|:|.|:|.||
BPUM_0268 451 DYAQTVPKVILYHTEYNGELTRSDAAALIFLNEMGVDLFVYHPAGYQCIE 500
BSNT_00518___ 500 QFIEEDQYDIHWLDDMVFQQDYKEPSLVKRLFRTITQK 537
::|::..:|.||||:||..|::||||:|::||::|..:
BPUM_0268 501 RYIDDQLFDTHWLDEMVMNQEFKEPSIVRKLFQSIKNR 538
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