Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00511 and BPUM_0259

See DNA alignment / Visit BSNT_00511 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:20
# Commandline: needle
#    -asequence pep-align/BSNT_00511.1.24716.seq
#    -bsequence pep-align/BPUM_0259.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00511-BPUM_0259.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00511-BPUM_0259.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00511
# 2: BPUM_0259
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity:      86/347 (24.8%)
# Similarity:   106/347 (30.5%)
# Gaps:         217/347 (62.5%)
# Score: 447.0
# 
#
#=======================================

BSNT_00511         1 MPILVSPSKNRQKGSGLLIHLSILDQAPVSKGESPVSTLQHSVELAQFSE     50
                                      :..|.||||..:.||::...||.|:.:|||.:|
BPUM_0259          1 -----------------MPSLHILDQVAIPKGQTAQETLIHTTQLAQLAE     33

BSNT_00511        51 EWGYKRYWFAEHHSTKGLASTAPEIMIARIAAQTNTIRVGSGGVLLPQYS    100
                     ..||:||||||||||:|||||||||::|.|||.|:|:|.||||:||||||
BPUM_0259         34 TLGYERYWFAEHHSTRGLASTAPEILMAHIAAHTSTLRTGSGGILLPQYS     83

BSNT_00511       101 PFKVAETFRQLEALYPNRIDLGVGRSPGGTTKTRLALTDGV-KKLNRI--    147
                     ||||||..||||||||.||::|||:||||..:||||||||| |.|::.  
BPUM_0259         84 PFKVAEVTRQLEALYPGRIEIGVGKSPGGIERTRLALTDGVHKDLSQFDR    133

BSNT_00511       147 --------------------------------------------------    147
                                                                       
BPUM_0259        134 QLKDLLFYLSDSLPSGHPHAGVKASPLVDAHPPVWLLGLGENSAMQAAEL    183

BSNT_00511       147 --------------------------------------------------    147
                                                                       
BPUM_0259        184 GINYIFGHFIHPARGKQAFETYRSHFSPSVFSTQSHAMFAVFVICGETDE    233

BSNT_00511       147 --------------------------------------------------    147
                                                                       
BPUM_0259        234 EAERIASSTDLWLLRVEKGLDSRVPSIEEASTYHYTSQEKKKVLQNRQRM    283

BSNT_00511       147 -----------------------------------------------    147
                                                                    
BPUM_0259        284 IVGSKATVKEQLLRLMDRYQTDDIMILNNSFDPIEKQRSFKRIAELF    330


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