Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00488 and BPUM_0252
See
DNA alignment /
Visit
BSNT_00488 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:19
# Commandline: needle
# -asequence pep-align/BSNT_00488.1.24716.seq
# -bsequence pep-align/BPUM_0252___natA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00488-BPUM_0252___natA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00488-BPUM_0252___natA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00488
# 2: BPUM_0252___natA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 86/246 (35.0%)
# Similarity: 99/246 (40.2%)
# Gaps: 134/246 (54.5%)
# Score: 456.0
#
#
#=======================================
BSNT_00488 0 -------------------------------------------------- 0
BPUM_0252___n 1 MITLSDCSCWFKDKKKVVKAMKHMTFSVKEGEVVGILGENGAGKTTLLRA 50
BSNT_00488 0 -------------------------------------------------- 0
BPUM_0252___n 51 VATLLEPTHGSVTVAGFDTVKESTEVKKRIGVLFGGETGLYDRLTARENL 100
BSNT_00488 1 ----------------------------------MGGFSKGMRQKVAIAR 16
:.|||:||:|||||||
BPUM_0252___n 101 EYFGKLYGLDQHEIKARIEDLAKRFGMRQYMDRKVKGFSRGMKQKVAIAR 150
BSNT_00488 17 ALIHDPDIILFDEPTTGLDITSSNIFREFIQQLKREQKTILFSSHIMEEV 66
.||||||||||||||||||||||||||:||.|||::.|||||||||||||
BPUM_0252___n 151 TLIHDPDIILFDEPTTGLDITSSNIFRDFIHQLKQQNKTILFSSHIMEEV 200
BSNT_00488 67 QALCDSVIMIHSGEVIYRGALESLYESERSEDLNYIFMSKLVRGIS 112
..|||||:|||.||::|:|.|..||..|:|:||||||||||.||:|
BPUM_0252___n 201 SQLCDSVMMIHQGELVYKGTLPELYTQEQSDDLNYIFMSKLARGVS 246
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.