Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00432 and BPUM_0245
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:18
# Commandline: needle
# -asequence pep-align/BSNT_00432.1.24716.seq
# -bsequence pep-align/BPUM_0245___ycbA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00432-BPUM_0245___ycbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00432-BPUM_0245___ycbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00432
# 2: BPUM_0245___ycbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 244/456 (53.5%)
# Similarity: 327/456 (71.7%)
# Gaps: 34/456 ( 7.5%)
# Score: 1246.0
#
#
#=======================================
BSNT_00432 1 MFWVKSNLQVFSRFPKIKSEDVINIKLERFIEKDGYILALMLITVPLAGE 50
:.|.:.::||.:||..|::.||||||
BPUM_0245___y 1 ------------------------MSLNQLVKKDAFILIFMVVIVPLAGE 26
BSNT_00432 51 LKFYPLNEEFRVSFGAPVFFFFLSLLRHVPAVLPGFLTGAAVFIFRVFLE 100
|||||:||.||:|||||.|||.|.|||.....|||||||||:.:|||.|:
BPUM_0245___y 27 LKFYPVNETFRISFGAPAFFFCLLLLRKSRPFLPGFLTGAAIVLFRVGLD 76
BSNT_00432 101 LWGGGHNGLTPILYDQASGFFFYMTYACLFSILKANRFRERPIMLGFIGF 150
|. ..|.|.....|.|...||||.|||.||..::..||::|.|.:|.||.
BPUM_0245___y 77 LI-QHHAGFAASFYQQFPSFFFYFTYAFLFFAVRTGRFKQRSIFIGIIGL 125
BSNT_00432 151 MIEVVSDCVELAVQFLIFHTVVTPEKITDIAVIAISHTFIVMSFYSVLKL 200
:||:::|.|||.||:|:|.|.:|..|::|:.:||.:|:|:|:||::::||
BPUM_0245___y 126 IIELLADFVELFVQYLVFDTTMTLSKLSDMFLIAFAHSFVVISFFNMMKL 175
BSNT_00432 201 YETQSREKQTRQQHEHMLMIVSNLYEETVHLKKTLKTTEKVTNDSYQFYR 250
||.||||||..:|:|||:|::|||||||||||||||.||.:|.:||:.||
BPUM_0245___y 176 YEAQSREKQIMKQNEHMMMVISNLYEETVHLKKTLKHTEHITQESYRLYR 225
BSNT_00432 251 EM----KGKDVQLSGRILRLAGEIHEVKKDNQRIFAGLSKLISNESLRDY 296
.: .||:| |..:|:|||||||||||||||:||||||||.|:::||
BPUM_0245___y 226 LLYEHEAGKEV--SQELLKLAGEIHEVKKDNQRIYAGLSKLISKENMQDY 273
BSNT_00432 297 MRASDLLQLVIRMNEKYAEALGKQIDFYCSIEGEH-DEYHVFIVLSIINN 345
|:|.:|:|:|:|:.||||.:|||.|.|...|.|.| .:|||||.||:|||
BPUM_0245___y 274 MKAEELVQIVLRIQEKYALSLGKNISFTSDIRGIHLHDYHVFIFLSLINN 323
BSNT_00432 346 LTANAVEAMDEEGMVSLRLRKPNESMVEFQVEDNGPGISEKIGDIVFDPG 395
|.||||||::..||:||.| |.:...:|.::||:||||.||:.|||||||
BPUM_0245___y 324 LMANAVEAIEGNGMISLVL-KGSHDKIEIRIEDDGPGIPEKMRDIVFDPG 372
BSNT_00432 396 FTSKYDEFGTPSTGIGLSYVKEIVTELEGDITFDNQQ-RGVVFAIRLPVR 444
:|||:|.:||||||||||||||:|.||.|.|..:.:: :|..|.:.||::
BPUM_0245___y 373 YTSKFDAYGTPSTGIGLSYVKELVKELGGQIKIEQRETKGTAFQLILPIQ 422
BSNT_00432 445 HLIQKG 450
:|||:|
BPUM_0245___y 423 NLIQRG 428
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