Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01836 and BPUM_0220

See DNA alignment / Visit BSNT_01836 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence pep-align/BSNT_01836___wprA.1.24716.seq
#    -bsequence pep-align/BPUM_0220___wprA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01836___wprA-BPUM_0220___wprA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01836___wprA-BPUM_0220___wprA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01836___wprA
# 2: BPUM_0220___wprA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 900
# Identity:     452/900 (50.2%)
# Similarity:   618/900 (68.7%)
# Gaps:          17/900 ( 1.9%)
# Score: 2256.0
# 
#
#=======================================

BSNT_01836___      1 MKRRKLSSVVAAVLIFALIFSLFS-PGTKAAAAGA---IDQAAALENGKE     46
                     |.::::.|.|  :::.|:|..:.: ||.:||||..   :::|..|:||:.
BPUM_0220___w      1 MFKKQVKSCV--IVLMAIILCMAALPGYEAAAASKGTNVNEAIGLKNGEV     48

BSNT_01836___     47 QTGAMKEPEQVKWYKVTPGATEIQKHSHMALTVKSDSVLNVSVYPSKEKA     96
                     .:|.::...:..||::||.|.|:.|.:||.::|||..||:|||||||::|
BPUM_0220___w     49 ISGTLQNEMEESWYQITPSAQEVVKDTHMKISVKSKQVLSVSVYPSKDRA     98

BSNT_01836___     97 LKDETFEMYRSFTADDGKSEVIFPYAWSGPYYVKVEYLGEEEPEDDGTAE    146
                     :||:|:..||..|| .|::||.||:||||||||||.|||.||...|...:
BPUM_0220___w     99 MKDDTYSRYRVDTA-SGETEVDFPHAWSGPYYVKVLYLGSEEDSRDEEED    147

BSNT_01836___    147 AAAEAKYTIGYKGTKKQPSDLEEEEACPVEMSVDQKKSGKGILDKLRAIR    196
                     ||    |||||||....||:....|....::.:.:||.|:.||..:|.|.
BPUM_0220___w    148 AA----YTIGYKGANLPPSEPVFPEDDEFDIIIIEKKYGREILQSIRTIE    193

BSNT_01836___    197 DEQLSQTAEGKELTSLYYKAAPFIVAKLALNKTARNEIYQDLVTLKPLFD    246
                     |::.::|..|::|:.:..|..||:.:||...|..:.::|..|:|||.|.:
BPUM_0220___w    194 DKRFNETPNGQKLSRVLQKTKPFLKSKLIKQKNEQQKVYNHLLTLKSLLN    243

BSNT_01836___    247 DVSENGASSSYKVTEKDQKAINRLYDKALQSVPSFLKEEIKKQADRLNMK    296
                     ||.:|||.|.:.||||:|:||..|:|....:.|::||:|::..:.::.:.
BPUM_0220___w    244 DVEKNGAFSGHIVTEKEQQAIRSLFDMLKGASPAYLKKELEAVSQQIGID    293

BSNT_01836___    297 QLQGKTAGAILTENNIAAKSEVQTTKVIFKVKDNKSLSSVHNEMKGFSAS    346
                     ||:||:.|.:|.:..:..:..|:|.|:|||:||.::|.|...:||.:  .
BPUM_0220___w    294 QLEGKSIGYVLEKQKLVKEENVKTNKIIFKLKDGQTLQSAKKKMKSY--G    341

BSNT_01836___    347 AQSKKDISNVKKAKKLFDNLYSFELPKDEKQNGAYTASAKRV-KSAAATL    395
                     .|..:..|  :....||..:|.:::|..::..|....:.|.| ||.|..|
BPUM_0220___w    342 IQENRVTS--QSVSPLFKGMYVYDVPAGQESAGETLKAGKAVIKSTARKL    389

BSNT_01836___    396 SKMSNVEFAEPVQEYKSLANDIQYPYQWPLKNNGENGGVKNADVKYEPAN    445
                     |.|.|||||||||.|::|:||:||.|||||||:|:|.|.|.||||::..|
BPUM_0220___w    390 SSMPNVEFAEPVQTYRALSNDVQYGYQWPLKNSGQNSGKKGADVKFDQMN    439

BSNT_01836___    446 TLLSKRKLNDTLIAVVDTGVDSTLADLKGKVRTDLGHNFVGRNNNAMDDQ    495
                     ||:...|:..||||||||||||.|.||.|.||||||.|.:|||.:|:||.
BPUM_0220___w    440 TLIGTSKMKQTLIAVVDTGVDSRLTDLSGTVRTDLGANLIGRNKDAIDDN    489

BSNT_01836___    496 GHGTHVAGIIAAQSDNGYSMTGLNAKAKIIPVKVLDSAGSGDTEQIALGI    545
                     ||||||||||||::||.|||.|||....||||||||:.|.||||.|||||
BPUM_0220___w    490 GHGTHVAGIIAAKADNHYSMAGLNQHTGIIPVKVLDAYGFGDTEHIALGI    539

BSNT_01836___    546 KYAADKGAKVINLSLGGGYSRVLEFALKYAADKNVLIAAASGNDGENALS    595
                     |:|.||||||||:||||.||||:|:|:.|||.:|||:..||||||...:.
BPUM_0220___w    540 KHAVDKGAKVINMSLGGYYSRVIEYAMNYAAQRNVLVVVASGNDGVPEMG    589

BSNT_01836___    596 YPASSKYVMSVGATNRMDMTADFSNYGKGLDISAPGSDIPSLVPNGNVTY    645
                     |||:|||.|::||:||||:.|:||::||||.:||||||||||:|:|||:|
BPUM_0220___w    590 YPATSKYAMAIGASNRMDIAAEFSSFGKGLSMSAPGSDIPSLMPDGNVSY    639

BSNT_01836___    646 MSGTSMATPYAAAAAGLLFAQNPKLKRTEVEDMLKKTADDISFESVDGGE    695
                     :|||||||||.|||||||.::||.||..:|.::|:.|||:|||.||||.:
BPUM_0220___w    640 LSGTSMATPYVAAAAGLLLSKNPTLKPNQVRNILQSTADNISFTSVDGTD    689

BSNT_01836___    696 EELYDDYGDPIEIPKTPGVDWHSGYGRLNVMKAVSAADLQLKVNKLESTQ    745
                     :..||:..:||..||.|||||.:|:||||...|:||.:|...|:|:|...
BPUM_0220___w    690 DVFYDENEEPIVDPKIPGVDWMTGHGRLNAFAALSAVELNASVSKVEDQH    739

BSNT_01836___    746 TAVRGNAKEGTLIEVMNGKKKLGSAKAGKDNAFKVNIAPQKQDQVLYVKA    795
                     ..|.|.||.|..|.|..||..||:..|||:..|.|.|..|.:::||::|.
BPUM_0220___w    740 QKVTGKAKAGAAISVYRGKTLLGTGTAGKNGTFSVKIKHQNKNKVLHIKI    789

BSNT_01836___    796 TKGDAKTSYKVVVVKGKPSGTPKVNAVKTKDTAVKGKANSKAMIRVKNKS    845
                     :||.|.|:.|.||.|||....|||..|..|...|||.|.:...|:|||||
BPUM_0220___w    790 SKGKAATTLKTVVKKGKAPAKPKVGKVTVKSKTVKGTAGAGLTIKVKNKS    839

BSNT_01836___    846 KKVIASAKADAKGTFSVKIKKQKAGTVLYVTAADTDKKESKEAKVVVEK-    894
                     ||||.:.|.:.||.|:.:||.|||.|||||||:|..|:|||..||||.| 
BPUM_0220___w    840 KKVIKTVKTNNKGAFTAQIKPQKAKTVLYVTASDVRKRESKAVKVVVVKK    889


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01836 and BPUM_0220

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
