Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00317 and BPUM_0154
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:14
# Commandline: needle
# -asequence pep-align/BSNT_00317___ybbD.1.24716.seq
# -bsequence pep-align/BPUM_0154___ybbD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00317___ybbD-BPUM_0154___ybbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00317___ybbD-BPUM_0154___ybbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00317___ybbD
# 2: BPUM_0154___ybbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 644
# Identity: 419/644 (65.1%)
# Similarity: 510/644 (79.2%)
# Gaps: 7/644 ( 1.1%)
# Score: 2177.5
#
#
#=======================================
BSNT_00317___ 1 -MRPVFPLILSAVLFLSCFFGARQTEASASKRAIDANQIVNRMSLDEKLG 49
::.:|| |.|.|:....:..||..:|.....|.|:|..||||||:|
BPUM_0154___y 1 MLKALFP----AALVLALLTSSIPTEKVSSAPLPTAKQMVQNMSLDEKIG 46
BSNT_00317___ 50 QMLMPDFRNWQKEGESSPQALTEMNDEVASLVKKYQFGGIILFAENVKTT 99
|||||||||||.:.||:|...|:||.||:.||:||..||:|||||||..|
BPUM_0154___y 47 QMLMPDFRNWQTKDESTPTGFTKMNKEVSHLVEKYHLGGVILFAENVVDT 96
BSNT_00317___ 100 KQTVQLTDDYQKASPKIPLMLSIDQEGGIVTRLGEGTNFPGNMALGAARS 149
||||:||.::|||||||||::||||||||||||.:||:|||||::||:||
BPUM_0154___y 97 KQTVKLTHEFQKASPKIPLLISIDQEGGIVTRLQKGTHFPGNMSIGASRS 146
BSNT_00317___ 150 RINAYQTGSIIGKELSALGINTDFSPVVDINNNPNNPVIGVRSFSSNREL 199
:.|||.||.||||||:.|||||:||||:|:||||||||||||||||:..|
BPUM_0154___y 147 KKNAYDTGKIIGKELNTLGINTNFSPVLDVNNNPNNPVIGVRSFSSDPAL 196
BSNT_00317___ 200 TSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLRE 249
.:||||.||||||::...|.||||||||||.||||||||||.|..:||::
BPUM_0154___y 197 VTRLGLQTMKGLQKEKTISTLKHFPGHGDTAVDSHYGLPLVEHDLDRLKK 246
BSNT_00317___ 250 VELYPFQKAIDAGADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKK 299
|||||||:||:|||||||||||||||.||||||||.||.:|:||||||||
BPUM_0154___y 247 VELYPFQQAINAGADMVMTAHVQFPAIDDTTYKSKKDGEEIMVPATLSKK 296
BSNT_00317___ 300 VMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVRAGVDIALMP 349
|:|.||::||||.||:||||||||||||:||||||||||::|||||||||
BPUM_0154___y 297 VITNLLKEEMGFQGVVVTDALNMKAIADNFGQEEAVVMAIKAGVDIALMP 346
BSNT_00317___ 350 ASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMY 399
|.|||||.|:....|..|:|:|:...:||..|||.|||:|:.||||||:.
BPUM_0154___y 347 APVTSLKTEKNLENVFNAVKQAIVKKEIPMSQINESVEKILQLKIKRGII 396
BSNT_00317___ 400 PARNSDSTKEKIAKAKKIVGSKQHLKAEKKIAEKAVTVLKNEQHTLPFKP 449
.::...:.::||.||.::||.|.|.|||:|:|.:.:|:|||...||||||
BPUM_0154___y 397 SSKKPMTLEKKIKKATQVVGKKSHRKAEQKMAREGITLLKNNNKTLPFKP 446
BSNT_00317___ 450 KKGSRILIVAPYEEQTASIEQTIHDLIKRKKIKPVSVDKMNFANQVFKAE 499
||..:||::||||:||.::..||..|||:||||||.:....||::.|..|
BPUM_0154___y 447 KKNDKILVMAPYEDQTKAMSVTIDSLIKQKKIKPVRIQSYAFADKSFNKE 496
BSNT_00317___ 500 HAKQVKKADYIITGSYVVKNDPVVNDGVIDDTISDSSKWATVFPRAVMKA 549
.||.::.|||:|||||||:|||.||||||||.:.|..||||.|||||||.
BPUM_0154___y 497 TAKLIQDADYVITGSYVVQNDPAVNDGVIDDNVQDPKKWATAFPRAVMKE 546
BSNT_00317___ 550 ALQHNKPFVLMSLRNPYDAANFEETKALIAVYGFKGYANGRYLQPNIPAG 599
|...||..|:||||||||||||||..||:||||||||:||::.|||||||
BPUM_0154___y 547 AAAQNKKMVVMSLRNPYDAANFEEADALLAVYGFKGYSNGQFNQPNIPAG 596
BSNT_00317___ 600 VMAIFGQAKPKGTLPVDIPSVTKPGNTLYPFGYGLNIKTGRPL- 642
:..|||.|.|||.|||||||||....||||||||||:| |:.:
BPUM_0154___y 597 LEVIFGTASPKGKLPVDIPSVTHQNQTLYPFGYGLNLK-GKQIK 639
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