Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00208 and BPUM_0093
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:08
# Commandline: needle
# -asequence pep-align/BSNT_00208___rpoB.1.24716.seq
# -bsequence pep-align/BPUM_0093___rpoB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00208___rpoB-BPUM_0093___rpoB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00208___rpoB-BPUM_0093___rpoB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00208___rpoB
# 2: BPUM_0093___rpoB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1196
# Identity: 1098/1196 (91.8%)
# Similarity: 1127/1196 (94.2%)
# Gaps: 50/1196 ( 4.2%)
# Score: 5688.0
#
#
#=======================================
BSNT_00208___ 0 -------------------------------------------------- 0
BPUM_0093___r 1 MNQLTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLRE 50
BSNT_00208___ 1 MFQDISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVR 50
|||||||||||||||||||||||||:|||||.||||||||||||||||||
BPUM_0093___r 51 MFQDISPIEDFTGNLSLEFIDYSLGDPKYPVAESKERDVTYSAPLRVKVR 100
BSNT_00208___ 51 LINKETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFS 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 101 LINKETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFS 150
BSNT_00208___ 101 GKVDKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLR 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 151 GKVDKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLR 200
BSNT_00208___ 151 ALGFGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPT 200
||||.|||||||||||||||||||:||||||:||||||||||||||||||
BPUM_0093___r 201 ALGFSSDQEILDLIGENEYLRNTLEKDNTENADKALLEIYERLRPGEPPT 250
BSNT_00208___ 201 VENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDP 250
|||||||||||||||||||||||||||||||||||||||||:||||||||
BPUM_0093___r 251 VENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQKLAETLVDP 300
BSNT_00208___ 251 ETGEILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSI 300
||||||||||||||||.||||||||||||||||||||||||||||.||||
BPUM_0093___r 301 ETGEILAEKGQILDRRVLDKVLPYLENGIGFRKLYPNGGVVEDEVELQSI 350
BSNT_00208___ 301 KIFAPTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGD 350
||:||:|||||||||||||||:||.:|||||:|||:||||||||||||||
BPUM_0093___r 351 KIYAPSDQEGEQVINVIGNAYVEEAVKNITPSDIIASISYFFNLLHGVGD 400
BSNT_00208___ 351 TDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQ 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 401 TDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQ 450
BSNT_00208___ 401 LINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRE 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 451 LINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRE 500
BSNT_00208___ 451 RAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPY 500
||||||||||||||||||||||||||||||||||||:|||||||||||||
BPUM_0093___r 501 RAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFGFIETPY 550
BSNT_00208___ 501 RRVDPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFR 550
|||||||||||.||||||||||||||||||||.|.|:|:||||:|:||||
BPUM_0093___r 551 RRVDPETGKVTPRIDYLTADEEDNYVVAQANALLADDGSFIDDNIIARFR 600
BSNT_00208___ 551 GENTVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQA 600
||||||.|||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 601 GENTVVPRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQA 650
BSNT_00208___ 601 VPLMQPEAPFVGTGMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEE 650
|||||||:|.|||||||||||||||||||::||:||||||||:||||||:
BPUM_0093___r 651 VPLMQPESPIVGTGMEYVSGKDSGAAVICRYPGVVERVEAKNIWVRRYED 700
BSNT_00208___ 651 VDGQKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEILADGPS 700
||||:|||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 701 VDGQQVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEILADGPS 750
BSNT_00208___ 701 MELGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYES 750
||.|||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 751 MEKGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYES 800
BSNT_00208___ 751 EARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVT 800
||||||||||||||||||||||||||||:|||||||||||||||||||||
BPUM_0093___r 801 EARDTKLGPEEITRDIPNVGEDALRNLDERGIIRIGAEVKDGDLLVGKVT 850
BSNT_00208___ 801 PKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNRED 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 851 PKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNRED 900
BSNT_00208___ 851 GDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYL 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 901 GDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYL 950
BSNT_00208___ 901 PDGTPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGARE 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 951 PDGTPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGARE 1000
BSNT_00208___ 951 EDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDK 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 1001 EDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDK 1050
BSNT_00208___ 1001 LHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 1051 LHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILT 1100
BSNT_00208___ 1051 VKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0093___r 1101 VKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSG 1150
BSNT_00208___ 1101 DEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE 1146
||||||||||||:|:.|:|||||||.||:..:.|..|:|||.||||
BPUM_0093___r 1151 DEEEIEMRDLEDDEETKKADGLALSNDEDAADLAPVDLERDAVTKE 1196
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