Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00185 and BPUM_0075
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:06
# Commandline: needle
# -asequence pep-align/BSNT_00185___ispD.1.24716.seq
# -bsequence pep-align/BPUM_0075___ispD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00185___ispD-BPUM_0075___ispD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00185___ispD-BPUM_0075___ispD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00185___ispD
# 2: BPUM_0075___ispD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 161/232 (69.4%)
# Similarity: 190/232 (81.9%)
# Gaps: 3/232 ( 1.3%)
# Score: 811.0
#
#
#=======================================
BSNT_00185___ 1 MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKII 50
|.|:||||||||||||||||||||||||..|||||||:|||:|.||.::|
BPUM_0075___i 1 MYYEVVIPAAGQGKRMKAGRNKLFIELKRMPVIIHTLKVFDAHAQCKRMI 50
BSNT_00185___ 51 LVINEQEREHFQQLLCDYPFQTSIELVAGGEERQHSVYKGLKAVKQEKIV 100
|.|||:||:.|::||..:.|||.:.||.||||||.|||:||||||...||
BPUM_0075___i 51 LAINEEERQDFERLLKVHAFQTPVSLVNGGEERQQSVYEGLKAVKDADIV 100
BSNT_00185___ 101 LVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQDLQVSETI 150
||||||||||||.|||.|:..|.:.|:|::||||||||||||:.:|.:||
BPUM_0075___i 101 LVHDGARPFIKHTQIDLLVKAAIEKGSAVVAVPVKDTIKRVQEGKVEQTI 150
BSNT_00185___ 151 ERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRV 200
||.||||||||||||.|:|.:||..|||.|||||||||||||:.|.:|.:
BPUM_0075___i 151 ERQSLWAVQTPQAFRHSILKEAHEYAERTGFLGTDDASLVEQLHGENVYI 200
BSNT_00185___ 201 VEGSYTNIKLTTPDDLTSAEAIMESESGNKHV 232
|:|.||||||||||||..|:|||::|.|.
BPUM_0075___i 201 VQGDYTNIKLTTPDDLLVAKAIMDAERGY--- 229
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