Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00180 and BPUM_0072

See DNA alignment / Visit BSNT_00180 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:06
# Commandline: needle
#    -asequence pep-align/BSNT_00180___radA.1.24716.seq
#    -bsequence pep-align/BPUM_0072___radA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00180___radA-BPUM_0072___radA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00180___radA-BPUM_0072___radA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00180___radA
# 2: BPUM_0072___radA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity:     381/459 (83.0%)
# Similarity:   413/459 (90.0%)
# Gaps:          21/459 ( 4.6%)
# Score: 1968.0
# 
#
#=======================================

BSNT_00180___      1 MAKTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPANRRAAFS     50
                                         ||||||||.||:|.||:::|.|||||:||:
BPUM_0072___r      1 --------------------MGKCPGCGTWNSMTEEVVRKEPANRRSAFN     30

BSNT_00180___     51 HSVQTVQKPSPITSIETSEEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDP    100
                     |||||:||||||::||||:|||:||.|.|||||||.|:||||||||||||
BPUM_0072___r     31 HSVQTIQKPSPISAIETSDEPRIKTNLEEFNRVLGSGIVKGSLVLIGGDP     80

BSNT_00180___    101 GIGKSTLLLQVSAQLSGSSNSVLYISGEESVKQTKLRADRLGINNPSLHV    150
                     ||||||||||||||||..:.:|||||||||:||||||||||||.:.||||
BPUM_0072___r     81 GIGKSTLLLQVSAQLSDKNQNVLYISGEESIKQTKLRADRLGIKSTSLHV    130

BSNT_00180___    151 LSETDMEYISSAIQEMNPAFVVVDSIQTVYQSDITSAPGSVSQVRECTAE    200
                     |:|||||||:||||||.||||||||||||||||||||||||||||||||:
BPUM_0072___r    131 LAETDMEYITSAIQEMKPAFVVVDSIQTVYQSDITSAPGSVSQVRECTAQ    180

BSNT_00180___    201 LMKIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYFEGERHHTFRI    250
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BPUM_0072___r    181 LMKIAKTNGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYFEGERHHTFRI    230

BSNT_00180___    251 LRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGSAGSSITAS    300
                     |||||||||||||:|||||||||||||||||||||||||||.:||.:.||
BPUM_0072___r    231 LRAVKNRFGSTNELGIFEMREEGLTEVLNPSEIFLEERSAGVSGSCVVAS    280

BSNT_00180___    301 MEGTRPILVEIQALISPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLL    350
                     ||||||:||||||||||||||||||||||:||||||||||||||||||||
BPUM_0072___r    281 MEGTRPVLVEIQALISPTSFGNPRRMATGLDHNRVSLLMAVLEKRVGLLL    330

BSNT_00180___    351 QNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADCFIGEVGLT    400
                     ||||||||||||||||||||||||.:||||||:|..|:.|||||||||||
BPUM_0072___r    331 QNQDAYLKVAGGVKLDEPAIDLAIAVSIASSFKDAAPHQADCFIGEVGLT    380

BSNT_00180___    401 GEVRRVSRIEQRVKEAAKLGFKRMIIPAANLDGWTKPKGIEVIGVANVAE    450
                     |||||||||||||:||||||||||.||.||:|||.||:|||::||.||||
BPUM_0072___r    381 GEVRRVSRIEQRVQEAAKLGFKRMFIPQANIDGWKKPRGIELVGVENVAE    430

BSNT_00180___    451 ALRTSLGG-    458
                     |||.|||| 
BPUM_0072___r    431 ALRISLGGS    439


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