Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00180 and BPUM_0072
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:06
# Commandline: needle
# -asequence pep-align/BSNT_00180___radA.1.24716.seq
# -bsequence pep-align/BPUM_0072___radA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00180___radA-BPUM_0072___radA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00180___radA-BPUM_0072___radA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00180___radA
# 2: BPUM_0072___radA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity: 381/459 (83.0%)
# Similarity: 413/459 (90.0%)
# Gaps: 21/459 ( 4.6%)
# Score: 1968.0
#
#
#=======================================
BSNT_00180___ 1 MAKTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPANRRAAFS 50
||||||||.||:|.||:::|.|||||:||:
BPUM_0072___r 1 --------------------MGKCPGCGTWNSMTEEVVRKEPANRRSAFN 30
BSNT_00180___ 51 HSVQTVQKPSPITSIETSEEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDP 100
|||||:||||||::||||:|||:||.|.|||||||.|:||||||||||||
BPUM_0072___r 31 HSVQTIQKPSPISAIETSDEPRIKTNLEEFNRVLGSGIVKGSLVLIGGDP 80
BSNT_00180___ 101 GIGKSTLLLQVSAQLSGSSNSVLYISGEESVKQTKLRADRLGINNPSLHV 150
||||||||||||||||..:.:|||||||||:||||||||||||.:.||||
BPUM_0072___r 81 GIGKSTLLLQVSAQLSDKNQNVLYISGEESIKQTKLRADRLGIKSTSLHV 130
BSNT_00180___ 151 LSETDMEYISSAIQEMNPAFVVVDSIQTVYQSDITSAPGSVSQVRECTAE 200
|:|||||||:||||||.||||||||||||||||||||||||||||||||:
BPUM_0072___r 131 LAETDMEYITSAIQEMKPAFVVVDSIQTVYQSDITSAPGSVSQVRECTAQ 180
BSNT_00180___ 201 LMKIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYFEGERHHTFRI 250
|||||||.||||||||||||||||||||||||||||||||||||||||||
BPUM_0072___r 181 LMKIAKTNGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYFEGERHHTFRI 230
BSNT_00180___ 251 LRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGSAGSSITAS 300
|||||||||||||:|||||||||||||||||||||||||||.:||.:.||
BPUM_0072___r 231 LRAVKNRFGSTNELGIFEMREEGLTEVLNPSEIFLEERSAGVSGSCVVAS 280
BSNT_00180___ 301 MEGTRPILVEIQALISPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLL 350
||||||:||||||||||||||||||||||:||||||||||||||||||||
BPUM_0072___r 281 MEGTRPVLVEIQALISPTSFGNPRRMATGLDHNRVSLLMAVLEKRVGLLL 330
BSNT_00180___ 351 QNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADCFIGEVGLT 400
||||||||||||||||||||||||.:||||||:|..|:.|||||||||||
BPUM_0072___r 331 QNQDAYLKVAGGVKLDEPAIDLAIAVSIASSFKDAAPHQADCFIGEVGLT 380
BSNT_00180___ 401 GEVRRVSRIEQRVKEAAKLGFKRMIIPAANLDGWTKPKGIEVIGVANVAE 450
|||||||||||||:||||||||||.||.||:|||.||:|||::||.||||
BPUM_0072___r 381 GEVRRVSRIEQRVQEAAKLGFKRMFIPQANIDGWKKPRGIELVGVENVAE 430
BSNT_00180___ 451 ALRTSLGG- 458
|||.||||
BPUM_0072___r 431 ALRISLGGS 439
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