Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00178 and BPUM_0071

See DNA alignment / Visit BSNT_00178 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:06
# Commandline: needle
#    -asequence pep-align/BSNT_00178___clpC.1.24716.seq
#    -bsequence pep-align/BPUM_0071___clpC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00178___clpC-BPUM_0071___clpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00178___clpC-BPUM_0071___clpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00178___clpC
# 2: BPUM_0071___clpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 811
# Identity:     779/811 (96.1%)
# Similarity:   797/811 (98.3%)
# Gaps:           1/811 ( 0.1%)
# Score: 3875.0
# 
#
#=======================================

BSNT_00178___      1 MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKAL     50
                     |||||||||||||||||||||:||||.|||||||||||||||||||||||
BPUM_0071___c      1 MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKAL     50

BSNT_00178___     51 QALGLGSDKIQKEVESLIGRGQEMSQTI-HYTPRAKKVIELSMDEARKLG     99
                     :||||.|||||||||||||||||:||.| |||||||||.|||||||||||
BPUM_0071___c     51 EALGLVSDKIQKEVESLIGRGQEVSQAIPHYTPRAKKVTELSMDEARKLG    100

BSNT_00178___    100 HSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGS    149
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
BPUM_0071___c    101 HSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGA    150

BSNT_00178___    150 SAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRR    199
                     ||||:|||||||||||||||||||||||||||||||||||||||||||||
BPUM_0071___c    151 SAAGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRR    200

BSNT_00178___    200 TKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVA    249
                     |||||||||||||||||||||||||||:||||||||||||||||||||||
BPUM_0071___c    201 TKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRVMTLDMGTVVA    250

BSNT_00178___    250 GTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNI    299
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0071___c    251 GTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNI    300

BSNT_00178___    300 LKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQ    349
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0071___c    301 LKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQ    350

BSNT_00178___    350 ILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAG    399
                     ||:||||||||||||||||:||||||||||||||||||||||||||||||
BPUM_0071___c    351 ILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG    400

BSNT_00178___    400 SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRL    449
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0071___c    401 SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRL    450

BSNT_00178___    450 REQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPVSKIAQTETDKL    499
                     ||:||.||||||||||||||||:|||||||||||||||||||||||||||
BPUM_0071___c    451 REKVEVTKKSWKEKQGQENSEVSVDDIAMVVSSWTGVPVSKIAQTETDKL    500

BSNT_00178___    500 LNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGV    549
                     ||||.:||||||||||||||||||||||||||||||||||||||||||||
BPUM_0071___c    501 LNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGV    550

BSNT_00178___    550 GKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEG    599
                     ||||||||||||||||||:||||||||||||||||||||||||||||:||
BPUM_0071___c    551 GKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEG    600

BSNT_00178___    600 GQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF    649
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0071___c    601 GQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF    650

BSNT_00178___    650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRP    699
                     |||||||||||||||||||||||||||||.||:||||.||||||||||||
BPUM_0071___c    651 RNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRP    700

BSNT_00178___    700 EFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKA    749
                     ||||||||||||||||||||.||||||||||||||||||||||||:||||
BPUM_0071___c    701 EFINRIDEIIVFHSLEKKHLKEIVSLMSDQLTKRLKEQDLSIELTEAAKA    750

BSNT_00178___    750 KVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDG    799
                     |:|:|||||||||||||||||||||||||||||:|||.|||.||||||||
BPUM_0071___c    751 KIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVEDG    800

BSNT_00178___    800 EFVVKTTAKTN    810
                     |.||||||.||
BPUM_0071___c    801 EIVVKTTAATN    811


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00178 and BPUM_0071

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
