Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00175 and BPUM_0069
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:05
# Commandline: needle
# -asequence pep-align/BSNT_00175.1.24716.seq
# -bsequence pep-align/BPUM_0069___mcsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00175-BPUM_0069___mcsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00175-BPUM_0069___mcsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00175
# 2: BPUM_0069___mcsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 71/193 (36.8%)
# Similarity: 98/193 (50.8%)
# Gaps: 72/193 (37.3%)
# Score: 400.0
#
#
#=======================================
BSNT_00175 0 -------------------------------------------------- 0
BPUM_0069___m 1 MKRLICQECNERPATFHFTKVINGEKQEMHICEQCAKENSDSYAMSGNQG 50
BSNT_00175 1 ------------MDSSF---QNAGTQMFSHSEQISACPKCGMTFQQFRKI 35
:|.|| .|.|:.:|..:.::..|||||:|||||||.
BPUM_0069___m 51 FSIHNLLSGLLNIDPSFTTSANKGSSIFQEAREVDQCPKCGLTFQQFRKT 100
BSNT_00175 36 GRFGCSECYKTFHSNITPILRKVHSGNTVHAGKIPKRIGGNLHVRRQIDM 85
|||||:|||::|...:.|:|||||||||||.||:||||.|:|||||::::
BPUM_0069___m 101 GRFGCAECYRSFDQYLNPVLRKVHSGNTVHNGKVPKRIAGSLHVRRKLEL 150
BSNT_00175 86 LKKELESLIHQEEFENAAHVRDQIRSLEQSLKSTDSEEEQE-- 126
:::||:.||.|||||.||.||||||:||. :..:::|
BPUM_0069___m 151 MQQELKQLIEQEEFEKAAEVRDQIRALEH-----EQSKQREGD 188
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