Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00115 and BPUM_0048

See DNA alignment / Visit BSNT_00115 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:03
# Commandline: needle
#    -asequence pep-align/BSNT_00115___spoIIE.1.24716.seq
#    -bsequence pep-align/BPUM_0048___spoIIE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00115___spoIIE-BPUM_0048___spoIIE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00115___spoIIE-BPUM_0048___spoIIE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00115___spoIIE
# 2: BPUM_0048___spoIIE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 832
# Identity:     663/832 (79.7%)
# Similarity:   741/832 (89.1%)
# Gaps:           7/832 ( 0.8%)
# Score: 3392.5
# 
#
#=======================================

BSNT_00115___      1 MRGMEKAERRVNGPMAGQALEKLQSFFNRGTKLVTHHLHSLFFYKGFIYV     50
                        |||.|||.:  :.|...|::.:...:...|..||.||||||||||||
BPUM_0048___s      1 ---MEKLERRTD--LTGAGFERISAGLKKMKNLFLHHTHSLFFYKGFIYV     45

BSNT_00115___     51 VIGFLLGRAFILSEVLPFALPFFGAMLLIRRDKAFYAVLAVLAGALTISP    100
                     |:||||||||||||::||||||||:||||:|||:..|.||:||||:||||
BPUM_0048___s     46 VLGFLLGRAFILSEIMPFALPFFGSMLLIKRDKSMLACLALLAGAMTISP     95

BSNT_00115___    101 KHSLLILAALLAFFVFSKVAAFITDDRVKALPIVVFFSMAAARAGFVYAQ    150
                     :::|.:.|:|:.|.:.|||.:||..|.||.||:|:..||...|..|||.:
BPUM_0048___s     96 QNALFVFASLIVFLLMSKVVSFIIKDPVKTLPVVIVLSMLITRGAFVYLE    145

BSNT_00115___    151 NGVFTTYDYVMAIVEAGLSFILTLIFLQSLPIFTVKKVKQSLKIEEIICF    200
                     .|...:||||||.|||||:||||||||||||||||:|:|.|||:||||||
BPUM_0048___s    146 QGAVQSYDYVMAGVEAGLAFILTLIFLQSLPIFTVRKIKHSLKVEEIICF    195

BSNT_00115___    201 MILIASVLTGLAGLSYQGMQAEHILARYVVLSFSFIGGASIGCTVGVVTG    250
                     |||||||||||||:::|||||||||:|||||||:||||||||||||||||
BPUM_0048___s    196 MILIASVLTGLAGITFQGMQAEHILSRYVVLSFAFIGGASIGCTVGVVTG    245

BSNT_00115___    251 LILGLANIGNLYQMSLLAFSGLLGGLLKEGKKAGAAIGLIVGSLLISLYG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0048___s    246 LILGLANIGNLYQMSLLAFSGLLGGLLKEGKKAGAAIGLIVGSLLISLYG    295

BSNT_00115___    301 EGSAGLMTTLYESLIAVGLFLLTPQSITRKVARYIPGTVEHLQEQQQYAR    350
                     |||||||.|||||||||.||||||||:|.|||:||||||||:||||||||
BPUM_0048___s    296 EGSAGLMNTLYESLIAVVLFLLTPQSVTSKVAKYIPGTVEHVQEQQQYAR    345

BSNT_00115___    351 KIRDVTAQKVDQFSNVFHALSESFATFYQA-SDEQTDDSEVDLFLSKITE    399
                     |:|||||:||||||||||||||||||||:: .:|:..:.:||||||.|||
BPUM_0048___s    346 KVRDVTAKKVDQFSNVFHALSESFATFYESIPEEKKQEEDVDLFLSTITE    395

BSNT_00115___    400 HSCQTCYKKNRCWVQNFDKTYDLMKQVMLETEEKEYASNRRLKKEFQQYC    449
                     .|||||||||:|||||||.||:||||||.|::||.|..||:|||:|.|:|
BPUM_0048___s    396 RSCQTCYKKNKCWVQNFDTTYELMKQVMQESDEKTYEHNRKLKKKFSQHC    445

BSNT_00115___    450 SKSKQVEELIEDELAHHHAHLTLKKKVQDSRRLVAEQLLGVSEVMADFSR    499
                     ||||.||||||:|:|::.|:.|||||||||||||||||:|||:||.||||
BPUM_0048___s    446 SKSKHVEELIEEEIAYYKANQTLKKKVQDSRRLVAEQLMGVSQVMEDFSR    495

BSNT_00115___    500 EIKREREQHFLQEEQIIEALQHFGIEIQHVEIYSLEQGNIDIEMTIPF-S    548
                     ||||||||||:||||:||||||||||||.||||||||||:||||.||: .
BPUM_0048___s    496 EIKREREQHFIQEEQMIEALQHFGIEIQQVEIYSLEQGNVDIEMRIPYCQ    545

BSNT_00115___    549 GHGESEKIIAPMLSDILEEQILVKAEQHSPHPNGYSHVAFGSTKSYRVST    598
                     ||||.||||||||||||||||||||||.:.||.||.||.|||.|||||:|
BPUM_0048___s    546 GHGECEKIIAPMLSDILEEQILVKAEQCAEHPTGYCHVVFGSAKSYRVAT    595

BSNT_00115___    599 GAAHAAKGGGLVSGDSYSMMELGARKYAAAISDGMGNGARAHFESNETIK    648
                     |.||||||||||||||||||||||.|||||||||||||||||||||||||
BPUM_0048___s    596 GVAHAAKGGGLVSGDSYSMMELGAGKYAAAISDGMGNGARAHFESNETIK    645

BSNT_00115___    649 LLEKILESGIDEKIAIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFL    698
                     ||||||.|||:||:||||||||||||||||||||||||||||||||||||
BPUM_0048___s    646 LLEKILASGINEKVAIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFL    695

BSNT_00115___    699 KVGSTPSFIKRGDQVMKVQASNLPIGIINEFDVEVVSEQLKAGDLLIMMS    748
                     |:||||||||||||||||||||||||||:||:|||||||:||||||||||
BPUM_0048___s    696 KIGSTPSFIKRGDQVMKVQASNLPIGIIDEFEVEVVSEQMKAGDLLIMMS    745

BSNT_00115___    749 DGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTRSGQIED    798
                     |||||||||:||||||:|||||..||.|||||||||||||||||||||:|
BPUM_0048___s    746 DGIFEGPKHIENHDLWVKRKMKSFKTEDPQEIADLLMEEVIRTRSGQIDD    795

BSNT_00115___    799 DMTVVVVRIDHNTPKWASIPVPAIFQNKQEIS    830
                     ||||||:|:|||||||||||....:..|||||
BPUM_0048___s    796 DMTVVVIRLDHNTPKWASIPTGTFYLEKQEIS    827


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00115 and BPUM_0048

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
