Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00096 and BPUM_0041
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:02
# Commandline: needle
# -asequence pep-align/BSNT_00096___yabM.1.24716.seq
# -bsequence pep-align/BPUM_0041___yabM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00096___yabM-BPUM_0041___yabM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00096___yabM-BPUM_0041___yabM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00096___yabM
# 2: BPUM_0041___yabM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 535
# Identity: 263/535 (49.2%)
# Similarity: 374/535 (69.9%)
# Gaps: 4/535 ( 0.7%)
# Score: 1323.0
#
#
#=======================================
BSNT_00096___ 1 MDDSIGVKRHWIWQGAFVLILAGVITKILSAVYRVPFQNIVGDVGFYIYQ 50
|.:::. :.||::|||.:|.:||:::|:|||||||||||||||.||||||
BPUM_0041___y 1 MKNAVN-QPHWLFQGAVILTIAGLLSKVLSAVYRVPFQNIVGDTGFYIYQ 49
BSNT_00096___ 51 QVYPFLGIAVMLSTSGFPVIISKLMNDYSEKNHHTILKISALFLSLIGIL 100
|||||||||:||.|:||||::|||::::.|:|...|.::|.::::|:.::
BPUM_0041___y 50 QVYPFLGIAIMLGTTGFPVMVSKLLSEHGEENRRIITRVSLVYITLLSLV 99
BSNT_00096___ 101 LFLCLYLGAVPIALFMGDSHLAVLIQVAACAFLLFPFVALLRGGFQGRHE 150
||||||:||..||..|.||.|.:|||::|..||..|...:|||.||....
BPUM_0041___y 100 LFLCLYIGAGRIASLMADSQLILLIQMSAFVFLFLPLTVMLRGVFQSDGM 149
BSNT_00096___ 151 MLPSALSQMTEQFLRVAVLLGLSFWLVKKGASLYTAGAAAASGSLAGSLV 200
|||:|:||:.||.:||.|||.|||:.|:.|.|||..||.|...|:|||..
BPUM_0041___y 150 MLPTAVSQLVEQLIRVGVLLVLSFYFVRHGYSLYETGAGAVFSSIAGSAA 199
BSNT_00096___ 201 ALVILGVFWFKTKRENQTDRQ-NENVITTKELTKKLLLYSVTICVSSLLL 249
:|::|...|...::::..... .:..:..|::.|.|:||:.|||||.||:
BPUM_0041___y 200 SLILLLFLWLTYRKQSSAPMTVKQTTLRKKDVLKSLVLYTFTICVSGLLI 249
BSNT_00096___ 250 LFIQLVDALNLYALL-SGGEASEEAKRLKGIYDRGQPLLQLGSVFAVSIA 298
|::|::||.:||||| |.|.:...||..||:||||||.||||:|||:||.
BPUM_0041___y 250 LWMQMIDAFHLYALLRSEGLSEAAAKAAKGVYDRGQPFLQLGTVFAISIG 299
BSNT_00096___ 299 TSLVPYISMAVKNKELKIMKEKITSSLKLCLVLGTGASVGLICILKPVNI 348
|||||::|.|::|.|.:.:::|:.:|:|...|||.|::|||||||..|||
BPUM_0041___y 300 TSLVPFLSAAMRNGEHEAIRQKVRTSIKTTSVLGIGSAVGLICILSSVNI 349
BSNT_00096___ 349 MLFQNGEGTGALQVFSCSILFASMAVTAAAVLQGAGYTVFPAIAVGAGVA 398
|||:|..||.|||:|..||.|.|:|:|.||:|||.|:||:||:.|...|.
BPUM_0041___y 350 MLFRNDLGTDALQIFCISIAFTSIAITQAALLQGLGHTVYPAVVVLLSVL 399
BSNT_00096___ 399 VKWVLNTLLVPRYGIEGASLATAASFAAVAGLNLYQLRQKEWLDKLRGVL 448
|||:|...|||..||.||:.:|...|.|.|.||.:.||.|.|:.......
BPUM_0041___y 400 VKWILTLALVPLLGIYGAAWSTVCGFLAAALLNAFYLRHKGWISLRELFP 449
BSNT_00096___ 449 IPIIGSALLMSAVLLAYTRLWTFLFPATGRGAAVIESLSAVAIGGAVFIY 498
:.|:.||..|:.||:.|..|::::.|...|..:|:|||::|.|||..|:|
BPUM_0041___y 450 VRILLSAAFMAIVLIGYQALFSWVIPFEKRPFSVLESLTSVFIGGFAFLY 499
BSNT_00096___ 499 CMMRLGIFTDEELNSVPFGSKLSKFMRRR-EQNGG 532
.:::|.:|||||...:|.|.|:..|.:.| .|||.
BPUM_0041___y 500 SILKLEVFTDEEWRLIPLGEKILYFKQMRGNQNGR 534
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