Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00078 and BPUM_0026

See DNA alignment / Visit BSNT_00078 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence pep-align/BSNT_00078___ksgA.1.24716.seq
#    -bsequence pep-align/BPUM_0026___ksgA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00078___ksgA-BPUM_0026___ksgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00078___ksgA-BPUM_0026___ksgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00078___ksgA
# 2: BPUM_0026___ksgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     247/292 (84.6%)
# Similarity:   269/292 (92.1%)
# Gaps:           0/292 ( 0.0%)
# Score: 1247.0
# 
#
#=======================================

BSNT_00078___      1 MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKT     50
                     |||||||||||||||||||||||||||||||||||||:|||||||||::|
BPUM_0026___k      1 MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILDRIVDHAEVTDET     50

BSNT_00078___     51 GVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLSPYENVTVIH    100
                     |||||||||||||||||||||||.||||||||||||.||||||:|||:||
BPUM_0026___k     51 GVIEIGPGIGALTEQLAKRAKKVTAFEIDQRLLPILNDTLSPYDNVTIIH    100

BSNT_00078___    101 QDVLKADVKSVIEEQFQDCDEIMVVANLPYYVTTPIIMKLLEEHLPLKGI    150
                     ||||||||..||||.|.||.|:|||||||||||||||||||||:||||||
BPUM_0026___k    101 QDVLKADVGKVIEENFADCKEVMVVANLPYYVTTPIIMKLLEENLPLKGI    150

BSNT_00078___    151 VVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPN    200
                     |||||||||:||||.||||||.|||||||:||||||||:|||||||||||
BPUM_0026___k    151 VVMLQKEVADRMAAIPSSKEYNSLSIAVQYYTEAKTVMVVPKTVFVPQPN    200

BSNT_00078___    201 VDSAVIRLILRDGPAVDVENESFFFQLIKASFAQRRKTLLNNLVNNLPEG    250
                     ||||||:|.:|:.|||.|||:.||||||:|||.||||||:|||:||||:|
BPUM_0026___k    201 VDSAVIKLTVRETPAVSVENDEFFFQLIRASFGQRRKTLMNNLMNNLPDG    250

BSNT_00078___    251 KAQKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF    292
                     |..|:.||:.|:..:||||||||||||||||.|||.|.||||
BPUM_0026___k    251 KQHKAIIEEALQTADIDGKRRGESLSIEEFARLSNVLQKALF    292


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