Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00070 and BPUM_0020

See DNA alignment / Visit BSNT_00070 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence pep-align/BSNT_00070___yabC.1.24716.seq
#    -bsequence pep-align/BPUM_0020___yabC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00070___yabC-BPUM_0020___yabC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00070___yabC-BPUM_0020___yabC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00070___yabC
# 2: BPUM_0020___yabC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     230/293 (78.5%)
# Similarity:   262/293 (89.4%)
# Gaps:           2/293 ( 0.7%)
# Score: 1230.0
# 
#
#=======================================

BSNT_00070___      1 MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTR     50
                      :..|.||:|:||||||||||||||||||||||||.|||.||.|||||||
BPUM_0020___y      1 -MNTQKSFDGQSDMGILYLVPTPIGNLEDMTFRAIQTLKDVDYIAAEDTR     49

BSNT_00070___     51 QTKKLCHVYEIETPLVSYHEHNKESSGHKIIEWLKSGKNIALVSDAGLPT    100
                     |||||||||||:|||.|||||||:|||||:|||||.||||||||||||||
BPUM_0020___y     50 QTKKLCHVYEIDTPLTSYHEHNKDSSGHKLIEWLKEGKNIALVSDAGLPT     99

BSNT_00070___    101 ISDPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVPQPFFFYGFLNR    150
                     |||||||:|:|||:|||||||||||||||||||||||.||||||||||:|
BPUM_0020___y    100 ISDPGAEVVRDFTNIGGYVVPLPGANAALTALIASGITPQPFFFYGFLDR    149

BSNT_00070___    151 QKKEKKKELEALKKRQETIIFYEAPHRLKETLSAMAEILGDREIAVTREL    200
                     |||||||:||||||||||||||||||||||||:.|.|:.|:|.||:||||
BPUM_0020___y    150 QKKEKKKQLEALKKRQETIIFYEAPHRLKETLTLMKEVWGNRNIAITREL    199

BSNT_00070___    201 TKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVD-EEEQWWET    249
                     |||:||||||.:..|:.||.|:||||||||||:|::.:|.: .||.||::
BPUM_0020___y    200 TKKFEEFIRGDLESVLTWATENQIRGEFCLVVQGNDQDEEELNEEVWWKS    249

BSNT_00070___    250 LTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ    292
                     |:.||||.|||.:|.|||||||:.||:|.||||.:||||||:|
BPUM_0020___y    250 LSEKEHVIHYIEEGLTSKEAIKRTAVERGVPKRTIYDAYHIEQ    292


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