Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05278 and BL05350

See DNA alignment / Visit BSNT_05278 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence pep-align/BSNT_05278.1.5803.seq
#    -bsequence pep-align/BL05350___yvdC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05278-BL05350___yvdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05278-BL05350___yvdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05278
# 2: BL05350___yvdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 111
# Identity:      49/111 (44.1%)
# Similarity:    59/111 (53.2%)
# Gaps:          42/111 (37.8%)
# Score: 237.5
# 
#
#=======================================

BSNT_05278         1 -------------------------------------MARAVRAYEIGRD     13
                                                          :||||||||||||
BL05350___yvd      1 MTITDAEQWTKAFYRERGWSEYGPFIRMGFLMEEAGELARAVRAYEIGRD     50

BSNT_05278        14 RPDEKESSRAEQKQELIEEMGDVIGNIAILADMYGVSLEDVMKAHQEKLT     63
                     ||||.:...||.|:|||||||||:||:.:||.:|||||||:|.||:.|||
BL05350___yvd     51 RPDEAKRPAAELKKELIEEMGDVMGNLIMLAGIYGVSLEDMMDAHRCKLT    100

BSNT_05278        64 KRF--EHA---     69
                     :||  ||.   
BL05350___yvd    101 ERFAGEHHQDQ    111


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