Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01002 and BL05259

See DNA alignment / Visit BSNT_01002 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_01002.1.5803.seq
#    -bsequence pep-align/BL05259.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01002-BL05259.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01002-BL05259.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01002
# 2: BL05259
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      44/110 (40.0%)
# Similarity:    57/110 (51.8%)
# Gaps:          39/110 (35.5%)
# Score: 231.0
# 
#
#=======================================

BSNT_01002         1 MEQMKITNLTDEQISFQLILHSGNARSCIIQSLRAYKEGNKDEADALIAK     50
                     ||::|:..||.|||.||||||||||||.:|||:|.|:.|:..:|:.|:.:
BL05259            1 MEKLKLDELTGEQICFQLILHSGNARSKVIQSIREYRAGSVQKAEELLQQ     50

BSNT_01002        51 AEQDLSAAHDIHFQMIQKESG-----------------------------     71
                     ||.||..:|||||||||||:|                             
BL05259           51 AEDDLQQSHDIHFQMIQKEAGGGKNEFSLLLLHAEDHLMSTLTMKELVSE    100

BSNT_01002        71 ----------     71
                               
BL05259          101 LLELFKEKSL    110


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