Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03504 and BL05252
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence pep-align/BSNT_03504___yqkK.1.5803.seq
# -bsequence pep-align/BL05252___yqkK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03504___yqkK-BL05252___yqkK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03504___yqkK-BL05252___yqkK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03504___yqkK
# 2: BL05252___yqkK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity: 40/123 (32.5%)
# Similarity: 45/123 (36.6%)
# Gaps: 52/123 (42.3%)
# Score: 175.5
#
#
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BSNT_03504___ 1 MAKSQAKKKREHRLRNGGRDVLLSRGSTPSFSTHERLTKSKKEIL----N 46
||||:|:|||||.|||.|||...|||..|.|.||.|.|||::|.| .
BL05252___yqk 1 MAKSKARKKREHMLRNTGRDAAASRGKAPDFGTHVRKTKSRREELAKLHM 50
BSNT_03504___ 47 KRKHKNPYDHTAVDDKDFFVPQKAA------------------------- 71
|.|.|||||....|.|..|..:.|.
BL05252___yqk 51 KHKRKNPYDLLHEDHKGSFFRRCANKCMCPDIRSNRSKGHRFVKRLQARN 100
BSNT_03504___ 71 ----------------------- 71
BL05252___yqk 101 RGAPPFFCFSCSCCHNISQAAWL 123
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