Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03502 and BL05250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence pep-align/BSNT_03502___spoIIM.1.5803.seq
# -bsequence pep-align/BL05250___spoIIM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03502___spoIIM-BL05250___spoIIM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03502___spoIIM-BL05250___spoIIM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03502___spoIIM
# 2: BL05250___spoIIM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 167/218 (76.6%)
# Similarity: 195/218 (89.4%)
# Gaps: 4/218 ( 1.8%)
# Score: 885.0
#
#
#=======================================
BSNT_03502___ 1 MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDL 50
|||.:.|::..:|:|||||:|:||||||.|||||||:|||||||.|||||
BL05250___spo 1 MRKPTIKELIFQHMKDHLSIYLFVSVLFLMGVIFGAVIVNSMTIGQKEDL 50
BSNT_03502___ 51 YYYLSQFFGQLSDGKQASSADMFGQSIFHNAKYLGLMWILGISVIGMPII 100
:|||:|||||||:||.|||.:||.||..||.||||||||||||:||:|:|
BL05250___spo 51 FYYLNQFFGQLSEGKAASSKEMFLQSFLHNMKYLGLMWILGISIIGLPVI 100
BSNT_03502___ 101 FIMIFLKGIVVGFTVGFLVNQMGVSGFFLSFVSVLPQNVLLIPAYLIMGT 150
|||:|||||||||||||||||||::|||||||||||||:|||||||||||
BL05250___spo 101 FIMVFLKGIVVGFTVGFLVNQMGINGFFLSFVSVLPQNILLIPAYLIMGT 150
BSNT_03502___ 151 CAIAFSLKLIRQLFVKRSLHDAPIQWFGRYAFVLLVILFLALISSLFEAY 200
||||||::|||||||||||.:||:.|||||||||::||.::||||.||||
BL05250___spo 151 CAIAFSMRLIRQLFVKRSLAEAPVHWFGRYAFVLVLILAMSLISSFFEAY 200
BSNT_03502___ 201 LSPVLMEKLTSRLF---- 214
||||||||||..:.
BL05250___spo 201 LSPVLMEKLTEYVLPKQH 218
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