Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02105 and BL05246

See DNA alignment / Visit BSNT_02105 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_02105.1.5803.seq
#    -bsequence pep-align/BL05246.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02105-BL05246.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02105-BL05246.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02105
# 2: BL05246
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      60/110 (54.5%)
# Similarity:    78/110 (70.9%)
# Gaps:           0/110 ( 0.0%)
# Score: 311.0
# 
#
#=======================================

BSNT_02105         1 MGTRVSYPVEVKQKAVEMRLAGVPMKEIMQELNIKNNTQIKTWVRWYKAG     50
                     |||||.|..|||.:.::|:.||:..||||::|.|||.||||||:||||.|
BL05246            1 MGTRVHYAEEVKWEVIKMKQAGMTNKEIMEQLGIKNKTQIKTWMRWYKTG     50

BSNT_02105        51 DTHRFEQPVGKQYTYGKGPEYSSELEKLQAENRYLRQQNEVLKKYNELER    100
                     .|:||.|.|||||:|||..|..||||:|:.:|:.|..|..::|||.|:||
BL05246           51 QTYRFSQQVGKQYSYGKESEEMSELEELKLKNKQLEAQLAIIKKYQEIER    100

BSNT_02105       101 KLIAKRQSNL    110
                     ....:..|.|
BL05246          101 SWSHESLSKL    110


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.