Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03299 and BL05232

See DNA alignment / Visit BSNT_03299 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_03299___ypvA.1.5803.seq
#    -bsequence pep-align/BL05232___ypvA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03299___ypvA-BL05232___ypvA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03299___ypvA-BL05232___ypvA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03299___ypvA
# 2: BL05232___ypvA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity:     503/642 (78.3%)
# Similarity:   568/642 (88.5%)
# Gaps:           4/642 ( 0.6%)
# Score: 2634.5
# 
#
#=======================================

BSNT_03299___      1 MTTSRLPFSLTKTKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQL     50
                     ||.||||||||||||||||||||||||||||||||||||||||:||||||
BL05232___ypv      1 MTASRLPFSLTKTKNFYEELNNWIGDVFYDILPEKGFDLRDEQIFMAFQL     50

BSNT_03299___     51 ERAFKEKKVMFAEAGVGTGKTLVYLLFAISYARYVGKPAIIACADETLIE    100
                     ||||||||||||||||||||||||||||:|||||.||||:||||||||||
BL05232___ypv     51 ERAFKEKKVMFAEAGVGTGKTLVYLLFALSYARYTGKPAVIACADETLIE    100

BSNT_03299___    101 QLVKKEGDISKLAEHLDLKIDTRLSKSHEQYLCLKKLEKTMQRSDDDKWL    150
                     |||||||||.|::|||.|.||.||||||:|||||||||||||||||:|||
BL05232___ypv    101 QLVKKEGDIYKISEHLGLTIDARLSKSHDQYLCLKKLEKTMQRSDDEKWL    150

BSNT_03299___    151 DLYESLPSFVHESQAMQRFYPYGDRKQYANLSNEEWSDVSYDSFQDCLTC    200
                     ||||||||||||||.||.||||||||:.::|||:|||::.||||||||||
BL05232___ypv    151 DLYESLPSFVHESQGMQAFYPYGDRKENSSLSNDEWSEIGYDSFQDCLTC    200

BSNT_03299___    201 DMRHRCGLTLSRDYYRKSTDLIICSHDFYMEHVWTEESRKREGQLPLLPD    250
                     |||||||||||||:||||||.||||||||||||||||:|||||||||||:
BL05232___ypv    201 DMRHRCGLTLSRDHYRKSTDFIICSHDFYMEHVWTEEARKREGQLPLLPE    250

BSNT_03299___    251 HSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIE    300
                     ||||||||||||||||||||||||||||||:||||||.||||||||||:|
BL05232___ypv    251 HSAVVFDEGHLLEFAAQKALTYRVKQSTLEMFLERLLGNDIREEFAELVE    300

BSNT_03299___    301 DALLANDEFFYVLSEESKEVAGSHRLEIKNDQRVKKAADELCRLLDKIGE    350
                     :||.||||||.:|:|.:::..||.|:.||:|..|||||.||..||:||||
BL05232___ypv    301 EALRANDEFFGLLTENAEKAEGSERMRIKDDTDVKKAAAELYDLLEKIGE    350

BSNT_03299___    351 ALVFESEMYTIDQYELSVVEEYVEQMAYSLSLYQKDAISWLEKKEAESTF    400
                     |||||.|:||||||.|:|||||:||||||||||:|:||||||:||.||||
BL05232___ypv    351 ALVFEGELYTIDQYALTVVEEYLEQMAYSLSLYRKNAISWLEQKELESTF    400

BSNT_03299___    401 VVMPRTVAEVLGEKVFSKKIPYIFSSATLSEGGSFDYIADSLGIHDYLSL    450
                     |||||||:||||||||||:||:|||||||||.|||||:|.||||.||||.
BL05232___ypv    401 VVMPRTVSEVLGEKVFSKQIPFIFSSATLSENGSFDYLATSLGIRDYLSF    450

BSNT_03299___    451 TVDSPYDYDEQMSINLYAKTDMAAEQKTAETIETIKRYKGRTLVLFPSFE    500
                     ||||||||:|||.:.::...:..|:::.|  |..||...|:||:||||||
BL05232___ypv    451 TVDSPYDYEEQMKVYIHQIEEKEAKEEAA--IRAIKESGGKTLILFPSFE    498

BSNT_03299___    501 ELNEFKELSAAWELPYPIFFEGDEEISSLVEKFQEEEETVLCSVHLWEGL    550
                     ||..||..:|.....:|::||||||||::|||||..||:|||||||||||
BL05232___ypv    499 ELLSFKRRTAQESFSFPVYFEGDEEISTIVEKFQTVEESVLCSVHLWEGL    548

BSNT_03299___    551 DIPGDALKNVTIWSLPFPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQ    600
                     |||||.|:||.|||||||||||||.|||:|. ::.|.||||||||||:||
BL05232___ypv    549 DIPGDPLQNVIIWSLPFPPHDPVFEAKRSGV-ENAFREVDLPYMLLRLRQ    597

BSNT_03299___    601 GIGRLIRSNQDSGSIHIYAGGENE-RIIDEVKKVLPVEPHMM    641
                     |||||||||.|||:|.|:||.|.| .:|.||:.||||:|..:
BL05232___ypv    598 GIGRLIRSNSDSGTISIFAGDEKEWNVIKEVESVLPVQPVYV    639


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