Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03299 and BL05232
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_03299___ypvA.1.5803.seq
# -bsequence pep-align/BL05232___ypvA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03299___ypvA-BL05232___ypvA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03299___ypvA-BL05232___ypvA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03299___ypvA
# 2: BL05232___ypvA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity: 503/642 (78.3%)
# Similarity: 568/642 (88.5%)
# Gaps: 4/642 ( 0.6%)
# Score: 2634.5
#
#
#=======================================
BSNT_03299___ 1 MTTSRLPFSLTKTKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQL 50
||.||||||||||||||||||||||||||||||||||||||||:||||||
BL05232___ypv 1 MTASRLPFSLTKTKNFYEELNNWIGDVFYDILPEKGFDLRDEQIFMAFQL 50
BSNT_03299___ 51 ERAFKEKKVMFAEAGVGTGKTLVYLLFAISYARYVGKPAIIACADETLIE 100
||||||||||||||||||||||||||||:|||||.||||:||||||||||
BL05232___ypv 51 ERAFKEKKVMFAEAGVGTGKTLVYLLFALSYARYTGKPAVIACADETLIE 100
BSNT_03299___ 101 QLVKKEGDISKLAEHLDLKIDTRLSKSHEQYLCLKKLEKTMQRSDDDKWL 150
|||||||||.|::|||.|.||.||||||:|||||||||||||||||:|||
BL05232___ypv 101 QLVKKEGDIYKISEHLGLTIDARLSKSHDQYLCLKKLEKTMQRSDDEKWL 150
BSNT_03299___ 151 DLYESLPSFVHESQAMQRFYPYGDRKQYANLSNEEWSDVSYDSFQDCLTC 200
||||||||||||||.||.||||||||:.::|||:|||::.||||||||||
BL05232___ypv 151 DLYESLPSFVHESQGMQAFYPYGDRKENSSLSNDEWSEIGYDSFQDCLTC 200
BSNT_03299___ 201 DMRHRCGLTLSRDYYRKSTDLIICSHDFYMEHVWTEESRKREGQLPLLPD 250
|||||||||||||:||||||.||||||||||||||||:|||||||||||:
BL05232___ypv 201 DMRHRCGLTLSRDHYRKSTDFIICSHDFYMEHVWTEEARKREGQLPLLPE 250
BSNT_03299___ 251 HSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIE 300
||||||||||||||||||||||||||||||:||||||.||||||||||:|
BL05232___ypv 251 HSAVVFDEGHLLEFAAQKALTYRVKQSTLEMFLERLLGNDIREEFAELVE 300
BSNT_03299___ 301 DALLANDEFFYVLSEESKEVAGSHRLEIKNDQRVKKAADELCRLLDKIGE 350
:||.||||||.:|:|.:::..||.|:.||:|..|||||.||..||:||||
BL05232___ypv 301 EALRANDEFFGLLTENAEKAEGSERMRIKDDTDVKKAAAELYDLLEKIGE 350
BSNT_03299___ 351 ALVFESEMYTIDQYELSVVEEYVEQMAYSLSLYQKDAISWLEKKEAESTF 400
|||||.|:||||||.|:|||||:||||||||||:|:||||||:||.||||
BL05232___ypv 351 ALVFEGELYTIDQYALTVVEEYLEQMAYSLSLYRKNAISWLEQKELESTF 400
BSNT_03299___ 401 VVMPRTVAEVLGEKVFSKKIPYIFSSATLSEGGSFDYIADSLGIHDYLSL 450
|||||||:||||||||||:||:|||||||||.|||||:|.||||.||||.
BL05232___ypv 401 VVMPRTVSEVLGEKVFSKQIPFIFSSATLSENGSFDYLATSLGIRDYLSF 450
BSNT_03299___ 451 TVDSPYDYDEQMSINLYAKTDMAAEQKTAETIETIKRYKGRTLVLFPSFE 500
||||||||:|||.:.::...:..|:::.| |..||...|:||:||||||
BL05232___ypv 451 TVDSPYDYEEQMKVYIHQIEEKEAKEEAA--IRAIKESGGKTLILFPSFE 498
BSNT_03299___ 501 ELNEFKELSAAWELPYPIFFEGDEEISSLVEKFQEEEETVLCSVHLWEGL 550
||..||..:|.....:|::||||||||::|||||..||:|||||||||||
BL05232___ypv 499 ELLSFKRRTAQESFSFPVYFEGDEEISTIVEKFQTVEESVLCSVHLWEGL 548
BSNT_03299___ 551 DIPGDALKNVTIWSLPFPPHDPVFTAKRNGAKKDPFEEVDLPYMLLRVRQ 600
|||||.|:||.|||||||||||||.|||:|. ::.|.||||||||||:||
BL05232___ypv 549 DIPGDPLQNVIIWSLPFPPHDPVFEAKRSGV-ENAFREVDLPYMLLRLRQ 597
BSNT_03299___ 601 GIGRLIRSNQDSGSIHIYAGGENE-RIIDEVKKVLPVEPHMM 641
|||||||||.|||:|.|:||.|.| .:|.||:.||||:|..:
BL05232___ypv 598 GIGRLIRSNSDSGTISIFAGDEKEWNVIKEVESVLPVQPVYV 639
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