Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01543 and BL05221
See
DNA alignment /
Visit
BSNT_01543 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence pep-align/BSNT_01543___yhcK.1.5803.seq
# -bsequence pep-align/BL05221___yhcK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01543___yhcK-BL05221___yhcK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01543___yhcK-BL05221___yhcK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01543___yhcK
# 2: BL05221___yhcK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 136/372 (36.6%)
# Similarity: 206/372 (55.4%)
# Gaps: 23/372 ( 6.2%)
# Score: 592.0
#
#
#=======================================
BSNT_01543___ 1 -MLKELFVNFTILITFNYLFTHL----FKERLVHKKDSISFQAVKGLACG 45
.|.:||:|..||||..:::|.| |..:..:|: ...:.|:..|
BL05221___yhc 1 MFLIDLFLNLCILITSLFIYTQLKWNIFSRKATNKQ----LDWIDGILGG 46
BSNT_01543___ 46 LLGVILMVFGF-TYQHSIIDLRNIPIMIAALYGGWVSTATALAMITAGRL 94
:||.:||.|.. ....:|:|||.:|:||..|:.|.........:|..||.
BL05221___yhc 47 VLGNVLMFFSIQATDETIVDLRYVPVMILFLFTGAFPAFICSLLIIGGRF 96
BSNT_01543___ 95 LITMNTS---ALYSVIIICIAAIPSLIVSRRKKVQLKHAFYLLIITNSLI 141
:...||| ||..:|:|.......|.:..:.....:..|.|:|..| :
BL05221___yhc 97 VYGTNTSSIAALIGMIVIFAGYYLILRIMDKDAGTYRKTFALVIFAN--V 144
BSNT_01543___ 142 SFSFYFLIDLHSY----ELHLYFWIISIAGGMLSLYIIDHETNAHLLFKQ 187
:.|...|:.||.: .|..:|||:|..||..|:||:.:...:|.|.|:
BL05221___yhc 145 AISIVILMILHDFFLMKMLLTWFWILSTIGGFTSVYIVSYLRKSHFLLKK 194
BSNT_01543___ 188 YKFQAHFDFLTGVYNRRKFEETTKALYQQAADTPHFQFALIYMDIDHFKT 237
|:.::..|:|||:.|.|:|:....|....|.: .:.:.:|:.:|||:|||
BL05221___yhc 195 YEEESSIDYLTGLNNVRQFDAIWNAHISNAKE-KNEKLSLLLIDIDYFKT 243
BSNT_01543___ 238 INDQYGHHEGDQVLKELGLRLKQSIRNTDPAARIGGEEFAVLLPNCSLDK 287
|||.|||..||.:|||||..||:|.|:.|..:|.|||||:|:|||||..:
BL05221___yhc 244 INDTYGHSNGDAILKELGTILKKSARSEDIVSRNGGEEFSVILPNCSHSQ 293
BSNT_01543___ 288 AARIAERIRRTVSDAPIVLTNGEELSVTISLGAAHYPNNTEQPGSLPILA 337
||.||||:|:.|......:::.:::.:|:|:|.|.:|......|.|...|
BL05221___yhc 294 AAEIAERVRKEVETHTFFISHSKKIHITVSIGVAAFPEVIHSTGELIEKA 343
BSNT_01543___ 338 DQMLYKAKETGRNRVCFSEKKE 359
||.||:||..||||||.|.
BL05221___yhc 344 DQCLYRAKHLGRNRVCTSV--- 362
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.