Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02973 and BL05190

See DNA alignment / Visit BSNT_02973 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02973___sspP.1.5803.seq
#    -bsequence pep-align/BL05190___sspP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02973___sspP-BL05190___sspP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02973___sspP-BL05190___sspP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02973___sspP
# 2: BL05190___sspP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 48
# Identity:      43/48 (89.6%)
# Similarity:    43/48 (89.6%)
# Gaps:           0/48 ( 0.0%)
# Score: 233.0
# 
#
#=======================================

BSNT_02973___      1 MTNKNTSKDMHKNAPKGHNPGQPEPLSGSKKVKNRNHTRQKHNSSHDM     48
                     |||||..|||.||||||..|||||||||||||||||||||||||||||
BL05190___ssp      1 MTNKNDGKDMRKNAPKGAQPGQPEPLSGSKKVKNRNHTRQKHNSSHDM     48


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