Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02957 and BL05188

See DNA alignment / Visit BSNT_02957 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence pep-align/BSNT_02957___yneA.1.5803.seq
#    -bsequence pep-align/BL05188___yneA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02957___yneA-BL05188___yneA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02957___yneA-BL05188___yneA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02957___yneA
# 2: BL05188___yneA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 103
# Identity:      57/103 (55.3%)
# Similarity:    75/103 (72.8%)
# Gaps:           0/103 ( 0.0%)
# Score: 307.0
# 
#
#=======================================

BSNT_02957___      1 MSKESIIFVGLFTVILSAVILMLSYTSSGQELNQYVKIEVQQGDTLWSIA     50
                     |.|||:|||.|||.::|..||.:|:....:|..||||||||:|||||.:|
BL05188___yne      1 MKKESLIFVSLFTAVISCCILFVSFAGKIEERKQYVKIEVQEGDTLWELA     50

BSNT_02957___     51 DQVADTKKINKNDFIEWVADKNQLQTSDIQPGDELVIPLKKKHQDAYELA    100
                     |::...|..:|:.|||||||||.|.||.|:|||.|::|:.|:|.|.|:||
BL05188___yne     51 DRIKGGKTADKHKFIEWVADKNNLPTSVIKPGDVLILPVAKQHSDQYQLA    100

BSNT_02957___    101 TVR    103
                     .|.
BL05188___yne    101 VVE    103


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