Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04757 and BL05135

See DNA alignment / Visit BSNT_04757 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence pep-align/BSNT_04757.1.5803.seq
#    -bsequence pep-align/BL05135.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04757-BL05135.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04757-BL05135.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04757
# 2: BL05135
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 362
# Identity:     112/362 (30.9%)
# Similarity:   184/362 (50.8%)
# Gaps:          24/362 ( 6.6%)
# Score: 433.5
# 
#
#=======================================

BSNT_04757         1 MAKGTKRIRARYTSATKRELPNITFDRAT--DI---VISGKIAEGLRERT     45
                          ..:|.|...|.|....| |::..|  |:   :.:.|::|||.:.|
BL05135            1 -----MYMRGRRRPAIKHSEKN-TYESKTLSDVCKQICNVKMSEGLTKET     44

BSNT_04757        46 IIDYKKIVRYFTEWLTQKYEDMEYVNDVTIEHLRAYIHYLRYERRRYEGH     95
                     |..|:::.....|:...|..... |..:.:|..|.|:.|:.:|::.::||
BL05135           45 IDRYRRVCESVEEFAEIKGLSTS-VESIDVEFARQYMTYILHEKKTFKGH     93

BSNT_04757        96 T-NIDATKQPVGLSETTVNIAIRTLTAYFNYLYAEGFIDPNPVERLKLIK    144
                     . ..::.|.| |.|....|..::|:.|.|.:...|..|..||.:::..:|
BL05135           94 RYKPESVKTP-GCSPKYANDHLKTMRAVFTFCIKENMISENPFQKINKVK    142

BSNT_04757       145 QDVDMTNNFTNEEVARILEQPEQRDFVGFRDYVGISLLLDSGLRIGELVG    194
                     |...:....:.||:.::|:.|.:|.|..|||||.:..|::|..||||:|.
BL05135          143 QPEPVIQILSVEEMKQLLKTPNKRKFSEFRDYVVMMCLINSMCRIGEIVT    192

BSNT_04757       195 LTVDEIDFSAPQIVLGGGRTKGRYFRIVPISTYCAKLLKQLIEENRAHFD    244
                     |.::.|:|....|:|...:||.|..|::|:.....:|||:|:..|.....
BL05135          193 LEIENINFELSYIILEAQKTKTRKGRMIPLDKNTMQLLKKLLLRNTRFKP    242

BSNT_04757       245 TNSVFVSSLGDQLTTNHFNKRLKFYAERAGIKTKKVTAHVYRHTWAKIMI    294
                     :..||::..|.:|||::|.|||..||.:||| .|:|..|::||| |..|.
BL05135          243 SKYVFITEEGTRLTTDNFRKRLADYAHQAGI-NKRVHPHLFRHT-AASMF    290

BSNT_04757       295 VDKKIDIYTVQKMGGWKDIRTLRRYVQLSTEDLRRSHDEGSPLMAIRDSR    344
                     :....|:..:|.:.|.||:|.:.||..||.|.|.|...|.|.:..:.|..
BL05135          291 LQAGGDLRHLQTIIGHKDLRMVLRYTHLSLESLARQQSEYSLINQVVDGL    340

BSNT_04757       345 RKRI--------    348
                     .|..        
BL05135          341 NKPRKTKRKYGR    352


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