Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01829 and BL05102

See DNA alignment / Visit BSNT_01829 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence pep-align/BSNT_01829___yisI.1.5803.seq
#    -bsequence pep-align/BL05102___yisI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01829___yisI-BL05102___yisI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01829___yisI-BL05102___yisI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01829___yisI
# 2: BL05102___yisI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 63
# Identity:      29/63 (46.0%)
# Similarity:    39/63 (61.9%)
# Gaps:          11/63 (17.5%)
# Score: 133.0
# 
#
#=======================================

BSNT_01829___      1 MNSKIEEMRITLIETAQKYGMNSKETIQCSQELDILLNTRIKE-------     43
                     ||:|||..|:.|.|.|:|:|:||||.|:||||||.|||.|:::       
BL05102___yis      1 MNNKIEAKRLALFEAAEKFGINSKEAIRCSQELDNLLNQRMQKDDNCVHA     50

BSNT_01829___     44 EMIFGRYLENSRM     56
                     |...||:..    
BL05102___yis     51 EERKGRHTS----     59


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