Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01171 and BL05097

See DNA alignment / Visit BSNT_01171 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:41
# Commandline: needle
#    -asequence pep-align/BSNT_01171___cotJA.1.5803.seq
#    -bsequence pep-align/BL05097___cotJA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01171___cotJA-BL05097___cotJA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01171___cotJA-BL05097___cotJA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01171___cotJA
# 2: BL05097___cotJA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 83
# Identity:      53/83 (63.9%)
# Similarity:    59/83 (71.1%)
# Gaps:           7/83 ( 8.4%)
# Score: 294.0
# 
#
#=======================================

BSNT_01171___      1 MK-DMQPFSPVKSYTPFHSRFDPCPPIGKKYYRTPPNLYMTFQPEHMEQF     49
                     || ..:.|:.||||.||||.|||||||||:|||||||||:.|||..:.||
BL05097___cot      1 MKHPKESFTKVKSYRPFHSAFDPCPPIGKRYYRTPPNLYLGFQPRGLPQF     50

BSNT_01171___     50 SPMEALRKGTLWKDLYDFYENPYRGGDAHGKKG     82
                     ||||||:|||||...||.|||||..|.      
BL05097___cot     51 SPMEALQKGTLWPVFYDHYENPYEDGR------     77


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