Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01599 and BL05089

See DNA alignment / Visit BSNT_01599 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_01599___glpF.1.5803.seq
#    -bsequence pep-align/BL05089___glpF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01599___glpF-BL05089___glpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01599___glpF-BL05089___glpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01599___glpF
# 2: BL05089___glpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     215/274 (78.5%)
# Similarity:   242/274 (88.3%)
# Gaps:           3/274 ( 1.1%)
# Score: 1183.0
# 
#
#=======================================

BSNT_01599___      1 MTAFWGEVIGTMLLIIFGAGVCAGVNLKKSLSFQSGWIVVVFGWGLGVAM     50
                     |||||||||||||||:||||||||||||||||.||||||:||||||||||
BL05089___glp      1 MTAFWGEVIGTMLLIVFGAGVCAGVNLKKSLSHQSGWIVIVFGWGLGVAM     50

BSNT_01599___     51 AAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGAVII    100
                     |.||||||||||||||:|:.|||||||||:|||.||..|||||.:|||::
BL05089___glp     51 AVYAVGGISGAHLNPAVTLGLAFVGDFPWEEVPSYILGQMIGAFLGAVLV    100

BSNT_01599___    101 YLHYLPHWKSTDDPAAKLGVFSTGPSIPHTFANVLSEVIGTFVLVLGILA    150
                     :||||||||.|:|..||||||||||:||:||||:.||.:|||:||||:|.
BL05089___glp    101 FLHYLPHWKETEDQGAKLGVFSTGPAIPNTFANLFSETLGTFILVLGLLT    150

BSNT_01599___    151 IGANQFTEGLNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAHAFLP    200
                     ||||:||:|||||:||||||||||||||||||||||||||||||||..||
BL05089___glp    151 IGANKFTDGLNPLVVGFLIVAIGISLGGTTGYAINPARDLGPRIAHFVLP    200

BSNT_01599___    201 IPGKGSSNWKYAWVPVVGPILGGSFGGVFYNAAFKGHITSSFWIVSVILV    250
                     |.|||||||||||:||:||.|||||.||||||.||||||::|||||||||
BL05089___glp    201 IAGKGSSNWKYAWIPVLGPALGGSFAGVFYNAVFKGHITNTFWIVSVILV    250

BSNT_01599___    251 VVLLGLYVYTKSYSAKTLSNSKYI    274
                     |:|||.|::.|..:.....|.   
BL05089___glp    251 VILLGFYIHMKKQAVDQSVNI---    271


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