Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01598 and BL05088
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:03
# Commandline: needle
# -asequence pep-align/BSNT_01598___glpP.1.5803.seq
# -bsequence pep-align/BL05088___glpP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01598___glpP-BL05088___glpP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01598___glpP-BL05088___glpP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01598___glpP
# 2: BL05088___glpP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 146/191 (76.4%)
# Similarity: 168/191 (88.0%)
# Gaps: 6/191 ( 3.1%)
# Score: 773.0
#
#
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BSNT_01598___ 1 MSFHNQPILPAIRNMKQFDEFLNSSFSYGVILDIHLGQLKGVIKEAQKHG 50
||||:|.||||:|||||||.||:|.|||||:||||||||.|||..|:.||
BL05088___glp 1 MSFHDQNILPAVRNMKQFDTFLDSPFSYGVLLDIHLGQLGGVISAARSHG 50
BSNT_01598___ 51 KNMMVHVDLIQGIKHDEYGAEFICQDIKPAGIISTRSNVIAKAKQKKIYA 100
|.|.|||||||||||||||||||||::|||||:||||:|||||||||:||
BL05088___glp 51 KKMFVHVDLIQGIKHDEYGAEFICQEMKPAGILSTRSSVIAKAKQKKVYA 100
BSNT_01598___ 101 IQRLFLLDTSAMEKSMEFIGKHKPDFIEVLPGIVPSLIQEIKEKTGIPIF 150
|||:||:|||||:||:|.:.||:||:||||||:||.||:|:||.||||||
BL05088___glp 101 IQRMFLIDTSAMKKSIELVKKHRPDYIEVLPGVVPELIREVKEITGIPIF 150
BSNT_01598___ 151 AGGFIRTEEDVEQALKAGAVAVTTSNTKLWKKYENFLTESD 191
||||||||:||||||.|||.|||||:|.|||||.|
BL05088___glp 151 AGGFIRTEKDVEQALAAGASAVTTSDTDLWKKYWN------ 185
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