Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01095 and BL05059

See DNA alignment / Visit BSNT_01095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence pep-align/BSNT_01095___yebC.1.5803.seq
#    -bsequence pep-align/BL05059___yebC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01095___yebC-BL05059___yebC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01095___yebC-BL05059___yebC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01095___yebC
# 2: BL05059___yebC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     101/267 (37.8%)
# Similarity:   150/267 (56.2%)
# Gaps:          15/267 ( 5.6%)
# Score: 465.5
# 
#
#=======================================

BSNT_01095___      1 MTEERKETFEEEINQSERIDADEEPLSRMSRKASRQSKQKQKQKQKPRQE     50
                     |.||..:..|::|.|        ||.|||||.:  :.|.|:.::..|   
BL05059___yeb      1 MIEEHHKRNEDDIEQ--------EPASRMSRNS--RKKAKKSKETNP---     37

BSNT_01095___     51 RGESTVKDKLASVWAAINRYCGFAFSILKSPAKTVVTDGFSHYKYGLISM    100
                      ..:.||..:.||.||:.||..|...|||||.:|.:....|::||.:|||
BL05059___yeb     38 -SAAKVKSVMESVIAALFRYFSFVLDILKSPVRTALDYDRSYFKYSVISM     86

BSNT_01095___    101 LIFSIIFSIGNWFQLKASWNRPLGFGERHHAFYDGFLVVLVYLLIFFAVM    150
                     .:.::.||:||::||.|...|.||||. ...|.:.||||.:|.:.|...|
BL05059___yeb     87 TLLAVFFSLGNFYQLLAGRGRILGFGV-SVPFMEVFLVVFIYCMAFMFWM    135

BSNT_01095___    151 VFAIWAVSRYMMKQKVTFREAAAVLGSLLVPVIAVSILWLIFAIVNIPML    200
                     ..|.||||.:|::.|.:|.:..|..||||||.|..:.||:||||:|....
BL05059___yeb    136 AAASWAVSNFMLRYKASFFDITAKYGSLLVPFIVPAALWMIFAIINFTAA    185

BSNT_01095___    201 TVLFTVLILFSIFFIIALYVQRVYQAAQDAPIDYIYCVFAVVAIALLFTA    250
                     ||:.:::|...:.|.....:|.:|:.::....|.:||||.|..:.|:|..
BL05059___yeb    186 TVILSIVIFMGLTFGTFTLIQSIYEKSEKPRFDLMYCVFTVFLLELVFVG    235

BSNT_01095___    251 VTWPFISEYFTASLIPL    267
                     .||..:..|..:||||:
BL05059___yeb    236 ATWKLVGGYLLSSLIPV    252


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