Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04706 and BL04023

See DNA alignment / Visit BSNT_04706 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:55
# Commandline: needle
#    -asequence pep-align/BSNT_04706___dhbB.1.5803.seq
#    -bsequence pep-align/BL04023___dhbB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04706___dhbB-BL04023___dhbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04706___dhbB-BL04023___dhbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04706___dhbB
# 2: BL04023___dhbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity:     183/313 (58.5%)
# Similarity:   245/313 (78.3%)
# Gaps:           6/313 ( 1.9%)
# Score: 995.0
# 
#
#=======================================

BSNT_04706___      1 MAIPAIQPYQMPTASDMPQNKVSWVPDPNRAVLLIHDMQNYFVDAFTAGA     50
                     ||||||.|||||.||:||:|||||.|.|.||.|||||||.||::|:..|.
BL04023___dhb      1 MAIPAILPYQMPEASNMPKNKVSWTPHPKRAALLIHDMQQYFLNAYRYGE     50

BSNT_04706___     51 SPVIELSANIRKLKNQCVQLGIPVVYTAQPGSQNPDDRALLTDFWGPGLN    100
                     |||.:|.|||:||:.:|.:||:||::|||||:|.|::|.||.||||||:.
BL04023___dhb     51 SPVTDLLANIKKLRKRCAELGMPVIFTAQPGAQTPEERGLLQDFWGPGIG    100

BSNT_04706___    101 SGPYEEKIITELAPEDDDLVLTKWRYSAFKRTNLLEMMRKEGRDQLIITG    150
                     ..|.|:||:.||.|.:.|:|||||||:||::||||.::.::|||||||||
BL04023___dhb    101 PDPDEQKIVDELKPNEGDIVLTKWRYNAFRKTNLLGVLEEQGRDQLIITG    150

BSNT_04706___    151 IYAHIGCLVTACEAFMEDIKAFLVGDAVADFSLEKHQMALDYAAGRCAFT    200
                     ||||||||:|||:|||:||:.|.||||||||||:.|:||:.|||.||:.|
BL04023___dhb    151 IYAHIGCLMTACDAFMQDIETFFVGDAVADFSLKHHEMAITYAADRCSVT    200

BSNT_04706___    201 VMTDSLLDQLQNAPA-DVQKTSANTGKKNVFTCENIRKQIAELLQKTPED    249
                     :..:.||.:|::..: :..|.|::...|.:     ||:|:|.||.::||.
BL04023___dhb    201 ITAEQLLSRLKDGESHEHAKESSHALTKQI-----IREQVASLLLESPEK    245

BSNT_04706___    250 ITDQEDLLDRGLDSVRIMTLVEQWRREGAEVTFVELAERPTIEEWQKLLT    299
                     |:|.|:|:.||:||||||:|.|:|||.|.||:||||||.|:||.|.:||:
BL04023___dhb    246 ISDSENLIYRGIDSVRIMSLAERWRRAGREVSFVELAEDPSIENWWRLLS    295

BSNT_04706___    300 TRSQQVLPNADYL    312
                     :..:..||||||.
BL04023___dhb    296 SSKEAPLPNADYQ    308


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