Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05611 and BL04006
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence pep-align/BSNT_05611___ywmC.1.5803.seq
# -bsequence pep-align/BL04006___ywmC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05611___ywmC-BL04006___ywmC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05611___ywmC-BL04006___ywmC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05611___ywmC
# 2: BL04006___ywmC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 144/229 (62.9%)
# Similarity: 176/229 (76.9%)
# Gaps: 3/229 ( 1.3%)
# Score: 730.5
#
#
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BSNT_05611___ 1 MKKRLSLIMMTGLLFGLTSPAFAAEKTE--TEAKAPANVAVLLDASGSMA 48
|||:::|.::|.::..|.||||||||.: |.|:...|||::||||||||
BL04006___ywm 1 MKKKMTLGILTAMVLSLGSPAFAAEKKQEVTVAEDAPNVAIMLDASGSMA 50
BSNT_05611___ 49 KRIDGVSKFNSAKKEISKFASSLPEGTQVKMSVFGSEGNNKNSGKVQSCE 98
|:|.||||:..||.|...|.|.| |...|.|.|||||||||||||||||.
BL04006___ywm 51 KKIGGVSKYELAKNEAFSFGSKL-ENANVLMRVFGSEGNNKNSGKVQSCN 99
BSNT_05611___ 99 AIRNVYGFQSFNEQSFLNSLNTIGPTGWTPIAKALNEAKSSFDQLDAKGE 148
|||.|||||:::||||.||||.||||||||||.||.:||::.||||..|:
BL04006___ywm 100 AIRGVYGFQTYDEQSFRNSLNGIGPTGWTPIANALQDAKNALDQLDNNGK 149
BSNT_05611___ 149 KVVYLLTDGEETCGGNPIKTAKELQKENITVNVIGFDYKEGYKGQLNAIA 198
.||||||||||||||||:|.|.||:|.|..||||||||:..:.|||.:||
BL04006___ywm 150 NVVYLLTDGEETCGGNPVKVATELRKSNAVVNVIGFDYEGDFHGQLTSIA 199
BSNT_05611___ 199 KVGGGEYFPVYTQKDVEKIFTQQSLMLSK 227
..||||||...|:.|:::||||:::.|||
BL04006___ywm 200 AAGGGEYFQAKTKNDIKRIFTQEAIELSK 228
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