Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05614 and BL04005
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence pep-align/BSNT_05614___spoIID.1.5803.seq
# -bsequence pep-align/BL04005___spoIID.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05614___spoIID-BL04005___spoIID.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05614___spoIID-BL04005___spoIID.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05614___spoIID
# 2: BL04005___spoIID
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity: 242/343 (70.6%)
# Similarity: 284/343 (82.8%)
# Gaps: 5/343 ( 1.5%)
# Score: 1228.5
#
#
#=======================================
BSNT_05614___ 1 MKQFAITLSVLCALILLVPTLLVIPFQHNKEAGASVESEKTAVSTKPASK 50
|||..|.|:.:|.||||:|||||:||.....| :::||.|...:...|
BL04005___spo 1 MKQLIIVLAGICTLILLIPTLLVLPFHGGPGA---IKTEKHAQQHEEKKK 47
BSNT_05614___ 51 GAETLKASPVSIPVYRTANQSVENIPLEEYVIGVVASEMPATFKPEALKA 100
.|||.|||||||||||::.||:|||||||||||||||||.|..|||||
BL04005___spo 48 --VTLKESPVSIPVYRTADRKVEDIPLEEYVIGVVASEMPADFDIEALKA 95
BSNT_05614___ 101 QALAARTFIVRLMVSNSAVEAPKGSLVDDTQMFQVYKSKAELKKQWGTSY 150
|||||||:|||.|||..||::||||||||||||||||:|.||::.|...|
BL04005___spo 96 QALAARTYIVRQMVSEQAVQSPKGSLVDDTQMFQVYKNKEELRRLWKKDY 145
BSNT_05614___ 151 ETKLKKITDAVTSTQGKILTYNNQPIEASFFSTSNGYTENAEAYWTSAIP 200
:.|:||:|:||.|||||||||.::||:||||||||||||||.|||||.||
BL04005___spo 146 DWKIKKVTEAVASTQGKILTYEHKPIDASFFSTSNGYTENAGAYWTSDIP 195
BSNT_05614___ 201 YLKSVKSPWDKKSPKYKATKTFTAAEFQQKLGVKLDGSSAVGKITGETPG 250
||:||||.||.||||:...||||.|||:|||||||.||:::|:||..|||
BL04005___spo 196 YLQSVKSSWDTKSPKFLNHKTFTVAEFEQKLGVKLPGSNSIGEITERTPG 245
BSNT_05614___ 251 HQVATAVINGKTLKGRDIREKLGLNSADFEWKRNGDTITVTTRGFGHGVG 300
.:|||||||||.|:||||||||||.||||:|||:|:.|||||||||||||
BL04005___spo 246 KRVATAVINGKKLEGRDIREKLGLKSADFDWKRDGNQITVTTRGFGHGVG 295
BSNT_05614___ 301 MSQYGANFMAKEGKTVDDIVKYYYQGTQISEADAFLNKYMAKK 343
||||||::|||:||..:|||||||:||.:|.||.|||||||||
BL04005___spo 296 MSQYGAHYMAKDGKKAEDIVKYYYKGTAVSNADEFLNKYMAKK 338
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