Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05815 and BL03951

See DNA alignment / Visit BSNT_05815 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence pep-align/BSNT_05815___thiD.1.5803.seq
#    -bsequence pep-align/BL03951___thiD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05815___thiD-BL03951___thiD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05815___thiD-BL03951___thiD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05815___thiD
# 2: BL03951___thiD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     221/271 (81.5%)
# Similarity:   246/271 (90.8%)
# Gaps:           1/271 ( 0.4%)
# Score: 1138.0
# 
#
#=======================================

BSNT_05815___      1 MSMNKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSW     50
                     |:|:||||||||||||||||||||||||||||||||||||:|||||.|:|
BL03951___thi      1 MTMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVVVAMDPENNW     50

BSNT_05815___     51 DHQVFPIDTDTIRAQLATITDGIGVDAMKTGMLPTVDIIELAAKTIKEKQ    100
                     :|||||:||:.|||||:||.|||||||||||||||||||||||.|||:..
BL03951___thi     51 NHQVFPVDTEVIRAQLSTIVDGIGVDAMKTGMLPTVDIIELAADTIKKHS    100

BSNT_05815___    101 LKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG    150
                     :|||||||||||||||||||||||:||||.|||||||||||||||.|||.
BL03951___thi    101 MKNVVIDPVMVCKGANEVLYPEHAKALRELLAPLATVITPNLFEAGQLSR    150

BSNT_05815___    151 MDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEV    200
                     :.|:|||:.|.||||.||.||||:|:|||||||.||||||||:||..|||
BL03951___thi    151 LGEIKTVEQMKEAAKAIHGLGAQHVLITGGGKLNHEKAVDVLFDGRDAEV    200

BSNT_05815___    201 LESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIYAAKEFITAAIKES    250
                     :|.|.||||||||||||:|||:|||||||:.||||||:||.|||.||:||
BL03951___thi    201 IEGERIDTPYTHGAGCTYSAAITAELAKGSNVKEAIYSAKAFITEAIRES    250

BSNT_05815___    251 FPLNQYVGPTKHSALRLNQQS    271
                     |.|||||||||||||||:.: 
BL03951___thi    251 FRLNQYVGPTKHSALRLSGK-    270


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