Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05857 and BL03865

See DNA alignment / Visit BSNT_05857 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:56
# Commandline: needle
#    -asequence pep-align/BSNT_05857___thiM.1.5803.seq
#    -bsequence pep-align/BL03865___thiM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05857___thiM-BL03865___thiM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05857___thiM-BL03865___thiM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05857___thiM
# 2: BL03865___thiM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity:     173/272 (63.6%)
# Similarity:   207/272 (76.1%)
# Gaps:          22/272 ( 8.1%)
# Score: 861.0
# 
#
#=======================================

BSNT_05857___      1 -------------------MHSITNNVVTNFTANGLLALGASPVMAYAKE     31
                                        :|::|||||||||||||||||||||||||:|
BL03865___thi      1 MNMEDAARGIELVRKQKPLVHNMTNNVVTNFTANGLLALGASPVMAYARE     50

BSNT_05857___     32 EVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGA     81
                     |.||||||||||||||||||:|||||||||||||||||||||.|||||||
BL03865___thi     51 EAADMAKIAGALVLNIGTLSRESVEAMIIAGKSANEHGVPVIFDPVGAGA    100

BSNT_05857___     82 TPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDI    131
                     ||||||||:.|:|:|:::|:||||||||:|:| .|||||||||||..||.
BL03865___thi    101 TPFRTESAQAIMRKVKVSAVRGNAAEIANTLG-EDWLIKGVDAGEESGDR    149

BSNT_05857___    132 IRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLL    181
                     ..||::||:..:|.:.|||..|||.|.:..||:.|||:|||||||.|||.
BL03865___thi    150 TELAKKAAKLWDTAVIITGAEDVITDGTKTYTVGNGHQLLTKVTGTGCLF    199

BSNT_05857___    182 TSVVGAFCAVEENPLFAAIVAISSYGVAAQLAAKQTADQGPGSFQIELLN    231
                     |||:|||||||::...||:.|.:.||.||:|||.:|..:||||||||.||
BL03865___thi    200 TSVIGAFCAVEKDVCRAAVSAAAFYGTAAELAAAKTESRGPGSFQIEFLN    249

BSNT_05857___    232 KLSTVTEQDVQEWATIERVTVS    253
                     :|:.|...|::|...|..|.  
BL03865___thi    250 QLAAVEAMDIKERGRIREVE--    269


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