Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02095 and BL03801

See DNA alignment / Visit BSNT_02095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:34
# Commandline: needle
#    -asequence pep-align/BSNT_02095___yjmF.1.5803.seq
#    -bsequence pep-align/BL03801___yjmF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02095___yjmF-BL03801___yjmF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02095___yjmF-BL03801___yjmF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02095___yjmF
# 2: BL03801___yjmF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     176/284 (62.0%)
# Similarity:   214/284 (75.4%)
# Gaps:           8/284 ( 2.8%)
# Score: 887.5
# 
#
#=======================================

BSNT_02095___      1 MIPLHENLTGKTAVITGGSGVLCSAMARELARHGMKVAILNRTAEKGQAV     50
                     |:.:||||.||||||||||||||.||||||.|.||.|||||||.|||:.|
BL03801___yjm      1 MLEIHENLAGKTAVITGGSGVLCGAMARELGRQGMNVAILNRTVEKGELV     50

BSNT_02095___     51 VKEITAAGGTACAVAADVLDRMSLERAKEDILGQFGAVDLLINGAGGNHP    100
                     .:.:..|||.|.||..||:.:.|:|:||..:..:||..|||:||||||||
BL03801___yjm     51 AEAVRKAGGAAIAVECDVISQRSVEQAKRVVADRFGGCDLLVNGAGGNHP    100

BSNT_02095___    101 DAITDVETYEEAGEGQ----SFFDM--DERGFLTVFSTNFTGAFLASQVF    144
                     :..|..||:......|    :.||:  |:.|  :|.:.||.|:|:.:|.|
BL03801___yjm    101 NGTTSDETFNSEHIFQDNIKTLFDLNCDDVG--SVLNLNFLGSFIPTQQF    148

BSNT_02095___    145 GKELLKADSPAIINLSSMSAYSPMTKVPAYSAAKASINNFTMWMAVHFAE    194
                     .|.:|.....::||:|||||.:|||||||||||||.|:|||.|:||:.||
BL03801___yjm    149 AKMMLNQKGASVINISSMSAQTPMTKVPAYSAAKAGIDNFTKWLAVYLAE    198

BSNT_02095___    195 TGLRVNAIAPGFFLTKQNHDLLINQDGTFTSRSHKIIAGTPMKRFGKPED    244
                     ||:||||||||||||.||..||::|:|.||.|:.|||:.|||:|||||||
BL03801___yjm    199 TGIRVNAIAPGFFLTNQNERLLLDQNGEFTDRAKKIISHTPMRRFGKPED    248

BSNT_02095___    245 LLGTLLWLADESYSGFVTGITVPVDGGFMAYSGV    278
                     |||||||||||..|||||||||||||||.||:||
BL03801___yjm    249 LLGTLLWLADEKMSGFVTGITVPVDGGFTAYAGV    282


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