Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03050 and BL03798

See DNA alignment / Visit BSNT_03050 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_03050___ggt.1.5803.seq
#    -bsequence pep-align/BL03798___ggt.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03050___ggt-BL03798___ggt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03050___ggt-BL03798___ggt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03050___ggt
# 2: BL03798___ggt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     425/594 (71.5%)
# Similarity:   498/594 (83.8%)
# Gaps:          16/594 ( 2.7%)
# Score: 2230.5
# 
#
#=======================================

BSNT_03050___      1 MKRTWNVCLTALLSVLLVAGSVP---FHAEAKKPP--KSYDEYKQVDVGK     45
                     |:|         |:.|:||..:.   |.:...|..  .|..:..:|.|||
BL03798___ggt      1 MRR---------LAFLVVAFCLAVGCFFSPVSKAEGVMSGGDGDKVAVGK     41

BSNT_03050___     46 DGMVATAHALASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGG     95
                     ||||||||.|||:|||:||||||||||||:|||:||||||||||||||||
BL03798___ggt     42 DGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGG     91

BSNT_03050___     96 FMMVYDGKTKDTTIIDSRERAPAGATPDMFLDENGKAIPFSERVTKGTAV    145
                     |||||||:||:|:||:||||||.||.|||||||:||.||||||...|.||
BL03798___ggt     92 FMMVYDGETKETSIINSRERAPEGAKPDMFLDEDGKVIPFSERSRHGNAV    141

BSNT_03050___    146 GVPGTLKGLEEALDKWGTRSMKLLITPSIKLAEKGFPIDSVLADAISDYQ    195
                     ||||||||||.|..||||:.|:.||:|||||||:||||||||||||.|:|
BL03798___ggt    142 GVPGTLKGLEAAHKKWGTKKMEDLISPSIKLAEEGFPIDSVLADAIKDHQ    191

BSNT_03050___    196 EKLSRTAAKDVFLPNGEPLKEGDTLIQKDLAKTFKLIRSKGTDAFYKGKF    245
                     :|||:|||||:|||:||||||||.|:||||||||||||.:|:.|||.|:.
BL03798___ggt    192 DKLSKTAAKDIFLPDGEPLKEGDILVQKDLAKTFKLIRKEGSKAFYDGEI    241

BSNT_03050___    246 AKTLSDTVQDFGGSMTEKDLENYDITIDEPIWGDYQGYQIATTPPPSSGG    295
                     .:.::|.|||||||||..||..|::|.|:||||:|.||.||:.|||||||
BL03798___ggt    242 GRAIADVVQDFGGSMTPDDLSRYEVTTDKPIWGEYHGYDIASMPPPSSGG    291

BSNT_03050___    296 IFLLQMLKILDDFNLSQYDVRSWEKYQLLAETMHLSYADRASYAGDPEFV    345
                     :|:|||||::|||:|||||.:|:|||.||||||||||||||:||||||||
BL03798___ggt    292 VFMLQMLKLIDDFHLSQYDPKSFEKYHLLAETMHLSYADRAAYAGDPEFV    341

BSNT_03050___    346 NVPLKGLLHPDYIKERQQLINLDQVNKKPKAGDPWKYQEGSANYKQVEQP    395
                     :|||:|||.||||||||:||:||.:|:..|.||||||:||..||:.|.||
BL03798___ggt    342 DVPLRGLLDPDYIKERQKLISLDSMNRDVKEGDPWKYEEGEPNYEIVPQP    391

BSNT_03050___    396 KDKVEGQTTHFTVADRWGNVVSYTTTIEQLFGTGIMVPDYGVILNNELTD    445
                     :||..|:||||||.|:|||||||||||||||||||:||.||:.|||||||
BL03798___ggt    392 EDKTIGETTHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTD    441

BSNT_03050___    446 FDAIPGGANEVQPNKRPLSSMTPTILFKDDKPVLTVGSPGGATIISSVLQ    495
                     |||||||||||||||||||||||||:|||:|||||||||||.|||:||.|
BL03798___ggt    442 FDAIPGGANEVQPNKRPLSSMTPTIVFKDEKPVLTVGSPGGTTIIASVFQ    491

BSNT_03050___    496 TILYHIEYGMELKAAVEEPRIYTNSMSSYRYEDGVPKDVLSKLNGMGHKF    545
                     |||.:.||||.|:.|:|||||||||::|||||.|:|:||..|||..||||
BL03798___ggt    492 TILNYFEYGMSLQDAIEEPRIYTNSLTSYRYESGMPEDVRRKLNDFGHKF    541

BSNT_03050___    546 GTSPVDIGNVQSISIDHENGTFKGVADSSRNGAAIGINLKRK--    587
                     |::||||||||||.||.||.||.|||||||||.|:|:|:|..  
BL03798___ggt    542 GSNPVDIGNVQSIFIDRENKTFMGVADSSRNGTAVGVNIKTSAK    585


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03050 and BL03798

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
