Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02179 and BL03742
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_02179___htrA.1.5803.seq
# -bsequence pep-align/BL03742___htrA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02179___htrA-BL03742___htrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02179___htrA-BL03742___htrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02179___htrA
# 2: BL03742___htrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity: 287/453 (63.4%)
# Similarity: 349/453 (77.0%)
# Gaps: 24/453 ( 5.3%)
# Score: 1403.0
#
#
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BSNT_02179___ 1 MMDNYRDENRTKGNENEVFLTKENDQSASYSARNVIHDQEKKKRGFGWFR 50
|..|..|:..|| ||:.::.:....| |...|::||...|..
BL03742___htr 1 MEYNREDQLETK---NELIVSDQKPDQA-------IKKAEQQKRRLSWMT 40
BSNT_02179___ 51 PLLGGVIGGSLALGIYTFTPLGDHDSQDTAKQSSSQQ--QTQSVTATSTS 98
|:|.|:|||||.||:.|: .|...:||..|...| :|.:.:|:||.
BL03742___htr 41 PILSGIIGGSLVLGVTTY----QHSKDETANTSVQTQTNETSNSSASSTK 86
BSNT_02179___ 99 SESKKSSSSSSAFKSEDSSKISDMVEDLSPAIVGITNLQAQSNSSLFG-S 147
:.::|.||: :||.||.|||::|||||||:|.|.|:.|.:|| .
BL03742___htr 87 ANTEKLSST-------NSSDISTMVENVSPAIVGISNYQKQTESGMFGFE 129
BSNT_02179___ 148 SSSDSSEDTESGSGSGVIFKKENGKAYIITNNHVVEGASSLKVSLYDGTE 197
|:|.||.:.|:|:|||||:||.|||||||||||||||||.|.|||.:|.|
BL03742___htr 130 SNSSSSSEQETGTGSGVIYKKANGKAYIITNNHVVEGASKLTVSLSNGKE 179
BSNT_02179___ 198 VTAKLVGSDSLTDLAVLQISDDHVTKVANFGDSSDLRTGETVIAIGDPLG 247
|..||:||||||||||::||.|||.|||:|||||.|:.||:|||||:|||
BL03742___htr 180 VEGKLLGSDSLTDLAVVEISADHVEKVASFGDSSSLKAGESVIAIGNPLG 229
BSNT_02179___ 248 KDLSRTVTQGIVSGVDRTVSMSTSAGETSINVIQTDAAINPGNSGGPLLN 297
|||||||||||:||||||||:.||||:|.:||||||||||||||||.|||
BL03742___htr 230 KDLSRTVTQGIISGVDRTVSVDTSAGQTEMNVIQTDAAINPGNSGGALLN 279
BSNT_02179___ 298 TDGKIVGINSMKISEDDVEGIGFAIPSNDVKPIAEELLSKGQIERPYIGV 347
|.|:::|||||||||..||||||||||||||||||||:|||:||||:||:
BL03742___htr 280 TKGEVIGINSMKISESGVEGIGFAIPSNDVKPIAEELMSKGKIERPFIGI 329
BSNT_02179___ 348 SMLDLEQVPQNYQEGTLGLFGSQLNKGVYIREVASGSPAEKAGLKAEDII 397
.|:||||||:|||.|||||.|||||||||||:|||||||||||||..|:|
BL03742___htr 330 GMMDLEQVPENYQTGTLGLSGSQLNKGVYIRQVASGSPAEKAGLKENDVI 379
BSNT_02179___ 398 IGLKGKEIDTGSELRNILYKDAKIGETVEVKILRNGKEMTKKIKLDQKEE 447
:...|||.||||.|||:||.|||||:||:|.::||||.|||:|.|||||.
BL03742___htr 380 VSFNGKETDTGSALRNLLYNDAKIGDTVKVTLIRNGKTMTKQITLDQKES 429
BSNT_02179___ 448 KTS 450
.:|
BL03742___htr 430 ASS 432
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