Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03738 and BL03726

See DNA alignment / Visit BSNT_03738 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_03738___yqfZ.1.5803.seq
#    -bsequence pep-align/BL03726___yqfZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03738___yqfZ-BL03726___yqfZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03738___yqfZ-BL03726___yqfZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03738___yqfZ
# 2: BL03726___yqfZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 101
# Identity:      54/101 (53.5%)
# Similarity:    67/101 (66.3%)
# Gaps:           2/101 ( 2.0%)
# Score: 261.0
# 
#
#=======================================

BSNT_03738___      1 MKRLTLVCSIVFILFILVYDLKIGTIPIQDLPVYEASAKTAVQEPAYKTV     50
                     |||:.::.||:..|||:.||||.||||...||....:|:.......||:|
BL03726___yqf      1 MKRVIVLFSILLALFIVYYDLKSGTIPQNALPASTMAAEAPAASLQYKSV     50

BSNT_03738___     51 KVKPGDTVMSIVGSAGSP-DDIVKDFEALNPNVKANAIQAGTAYKFPVYP     99
                     .||||.||.||:|::..| |.|.:|||.|||||:|..||||..|||||||
BL03726___yqf     51 TVKPGQTVFSIIGNSAVPADKIAEDFEELNPNVEAGRIQAGVTYKFPVYP    100

BSNT_03738___     99 -     99
                      
BL03726___yqf    101 D    101


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.