Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02276 and BL03631
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_02276___ykrP.1.5803.seq
# -bsequence pep-align/BL03631___ykrP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02276___ykrP-BL03631___ykrP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02276___ykrP-BL03631___ykrP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02276___ykrP
# 2: BL03631___ykrP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 341
# Identity: 227/341 (66.6%)
# Similarity: 279/341 (81.8%)
# Gaps: 1/341 ( 0.3%)
# Score: 1235.0
#
#
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BSNT_02276___ 1 MSKSRDSYFDNAKFLLIFLVVFGHILRSFINDNHFMLYLYKFIYTFHMPA 50
|:.||||||||||||||||||||||:||:|:||..:|::|||||||||||
BL03631___ykr 1 MANSRDSYFDNAKFLLIFLVVFGHIIRSYIHDNDALLHIYKFIYTFHMPA 50
BSNT_02276___ 51 FILVSGYFAKGFKRAGYVKKLAVKLIIPYLIFQIIYSVFYYIMQDESMAN 100
|||:||||||||.|.|||||:|.|||:||||||.||::||..:.|:|:..
BL03631___ykr 51 FILISGYFAKGFNRPGYVKKIAWKLIVPYLIFQGIYTLFYSFIDDQSLTA 100
BSNT_02276___ 101 VNPIDPQWSLWFLVSLFFWNLLLYPFSKVSKQWALFVSCGIAVLIGYLDF 150
.||.:||||||||:|||||||||:||:|:..:||...|..||||:||:|.
BL03631___ykr 101 ANPFEPQWSLWFLLSLFFWNLLLFPFTKLPAKWAFAASFAIAVLVGYIDM 150
BSNT_02276___ 151 VSSTLSLSRTFVFLPMFLVGFYLNKHHFDLLRSKRGKQIALGVLAAVFVI 200
:|:||||||||||.|:||.|:||.|.||.:|:..:|||.||.||||.||.
BL03631___ykr 151 ISNTLSLSRTFVFFPVFLAGYYLQKDHFKMLKGWKGKQAALAVLAATFVF 200
BSNT_02276___ 201 CWGIDFDYSFLFGSKPYSSFGDVTLVSGLSRIGWYVLAFGATFSFLALVP 250
.:..|||||:||||||||.||||.:.|||:|:...|:.|.:||:|:||||
BL03631___ykr 201 YFFADFDYSWLFGSKPYSEFGDVGIKSGLNRVALLVITFASTFAFMALVP 250
BSNT_02276___ 251 QKRYFFTKWGTRTFYVYLLHGFIIKTLRQVGLEDWLTDYQSLVILLLLTA 300
::|||||.|||||||||||||||||:.|:.|.|:||.|||||.:|.:.||
BL03631___ykr 251 ERRYFFTLWGTRTFYVYLLHGFIIKSFRKTGAEEWLADYQSLTLLFIATA 300
BSNT_02276___ 301 ALTSVLSSNFVKTVAQPFIELRMTSLLQFV-RGTGKNAYLK 340
.||..|||.||||||||||||:||:|::.: :..|.|.|||
BL03631___ykr 301 ILTFCLSSGFVKTVAQPFIELKMTNLIRLLKKDNGYNPYLK 341
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