Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05173 and BL03453

See DNA alignment / Visit BSNT_05173 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:17
# Commandline: needle
#    -asequence pep-align/BSNT_05173___yvfF.1.5803.seq
#    -bsequence pep-align/BL03453___yvfF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05173___yvfF-BL03453___yvfF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05173___yvfF-BL03453___yvfF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05173___yvfF
# 2: BL03453___yvfF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity:     194/325 (59.7%)
# Similarity:   254/325 (78.2%)
# Gaps:           3/325 ( 0.9%)
# Score: 1042.0
# 
#
#=======================================

BSNT_05173___      1 MDSKHSMISLKQKLSGLLDVIPKQSEIIYADYPLYGNVGDLFIMKGTEAF     50
                     |...:||.|||.||:.:|||||:.|.::|.|||||||||||.||||||||
BL03453___yvf      1 MAITYSMDSLKHKLAEILDVIPRHSSVVYLDYPLYGNVGDLLIMKGTEAF     50

BSNT_05173___     51 FKEHGIRVRKRWNPDNFPVGRKLDPHLIIVCQGGGNFGDLYPYYQGFREK    100
                     |:.:||:||:|||.:||..||::....|||||||||||||||::|.|||:
BL03453___yvf     51 FEAYGIKVRERWNAENFIPGRRIPKDAIIVCQGGGNFGDLYPHFQQFRER    100

BSNT_05173___    101 IVQTYPNHKIVILPQSIYFQNKDNLKRTAEIFSKHANLHIMTREKASYAT    150
                     :|:.||:::|||||||||:::::|:.:|..|.:.|.:||:.||||||:..
BL03453___yvf    101 VVEHYPDNRIVILPQSIYYEHEENIIKTRGILAAHPDLHLFTREKASFDF    150

BSNT_05173___    151 AQAYF-TTNHIQLLPDMAHQLFPV-IPTQQPSNQKLRFIRTDHEANQALQ    198
                     |...| ...:|:::|||||||:|: .|.::||...||.||||.|||.:||
BL03453___yvf    151 AVKRFEEVKNIKMMPDMAHQLWPIAAPAEKPSESVLRLIRTDKEANSSLQ    200

BSNT_05173___    199 EHAEAESYDWRTVLSASDRRTIAFLQTLNVLNKKAGNPLPIAYIWEKYSD    248
                     :..|.::|||..:||..|:|.|..|||:||||||||||||||..|:::||
BL03453___yvf    201 KAGEPDTYDWNVILSEGDKRGIKRLQTINVLNKKAGNPLPIASYWKRFSD    250

BSNT_05173___    249 YIVQKAIRFFSRYESVETSRLHGHILSSLLQKENTVIDNSYGKNANYFHT    298
                     .:|.|:||||||||||.||||||||||.||.|||.||||||||||||::|
BL03453___yvf    251 SLVDKSIRFFSRYESVVTSRLHGHILSCLLGKENVVIDNSYGKNANYYNT    300

BSNT_05173___    299 WMEGVPSTHLIQ-HASKKENLPAHM    322
                     ||:.:|:|.||| |.::.|..|.|:
BL03453___yvf    301 WMKDIPNTKLIQNHQTEAEKPPVHV    325


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